Cow genome map

Conread name: Tra1-TCH01C020034

Conread position: 279-455
Cow position: chr1:38268802-38268981 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 300-485
Cow position: chr1:67884454-67884644 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 301-514
Cow position: chr1:1856588-1856371 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 147, 63

Conread position: 304-495
Cow position: chr1:89002107-89002295 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 306-500
Cow position: chr1:4045309-4045121 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 154, 64

Conread position: 306-501
Cow position: chr1:100819483-100819676 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 306-515
Cow position: chr1:68517652-68517860 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 190, 89

Conread position: 308-455
Cow position: chr1:17487933-17488080 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 309-527
Cow position: chr1:77927751-77927975 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 130, 55

Conread position: 310-538
Cow position: chr1:5216681-5216458 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 15

Conread position: 312-538
Cow position: chr1:78131065-78131290 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 180, 45

Conread position: 314-504
Cow position: chr1:42182799-42182612 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 159, 17

Conread position: 323-434
Cow position: chr1:95606611-95606500 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 323-442
Cow position: chr1:32350368-32350487 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 323-455
Cow position: chr1:54440696-54440564 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 323-495
Cow position: chr1:87946149-87946314 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 323-499
Cow position: chr1:12040865-12040692 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 323-499
Cow position: chr1:95425504-95425679 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 167, 0

Conread position: 323-500
Cow position: chr1:81234387-81234212 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 323-501
Cow position: chr1:51445044-51445221 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 162, 0

Conread position: 323-504
Cow position: chr1:68531039-68530859 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 163, 0

Conread position: 323-507
Cow position: chr1:92612782-92612598 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 163

Conread position: 323-510
Cow position: chr1:91993968-91993781 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 73

Conread position: 323-522
Cow position: chr1:59196754-59196554 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 164, 116

Conread position: 323-527
Cow position: chr1:83121206-83121429 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 323-530
Cow position: chr1:13787791-13787998 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 70

Conread position: 323-544
Cow position: chr1:87742245-87742471 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 73

Conread position: 323-549
Cow position: chr1:86397180-86397398 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 125, 41

Conread position: 323-550
Cow position: chr1:5653916-5654144 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 73

Conread position: 323-550
Cow position: chr1:15488544-15488315 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 73

Conread position: 323-550
Cow position: chr1:91788125-91788357 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 73

Conread position: 323-582
Cow position: chr1:40217761-40217498 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 72

Conread position: 324-529
Cow position: chr1:86644093-86644299 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 124, 71

Conread position: 325-499
Cow position: chr1:89839745-89839571 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 71

Conread position: 325-507
Cow position: chr1:5303989-5304170 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 147

Conread position: 329-582
Cow position: chr1:5179826-5179566 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 67

Conread position: 330-498
Cow position: chr1:96658410-96658241 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 31

Conread position: 333-507
Cow position: chr1:82516326-82516156 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 334-582
Cow position: chr1:47041545-47041802 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 30

Conread position: 334-582
Cow position: chr1:98767509-98767755 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 30, 62

Conread position: 341-549
Cow position: chr1:79954599-79954395 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 129

Conread position: 347-481
Cow position: chr1:100753340-100753474 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 347-582
Cow position: chr1:61099221-61098980 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 48

Conread position: 354-505
Cow position: chr1:92260234-92260085 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 17

Conread position: 366-499
Cow position: chr1:79626550-79626682 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 0

Show alignments to all cow chromosomes.