Cow genome map
Conread name: | Tra1-TCH01C020034 |
Conread position: | 279-455 |
Cow position: | chr1:38268802-38268981 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 300-485 |
Cow position: | chr1:67884454-67884644 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 139 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 301-514 |
Cow position: | chr1:1856588-1856371 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 152 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 147, 63 |
Conread position: | 304-495 |
Cow position: | chr1:89002107-89002295 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 137 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 306-500 |
Cow position: | chr1:4045309-4045121 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 138 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 154, 64 |
Conread position: | 306-501 |
Cow position: | chr1:100819483-100819676 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 136 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 306-515 |
Cow position: | chr1:68517652-68517860 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 190, 89 |
Conread position: | 308-455 |
Cow position: | chr1:17487933-17488080 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 309-527 |
Cow position: | chr1:77927751-77927975 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 159 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 130, 55 |
Conread position: | 310-538 |
Cow position: | chr1:5216681-5216458 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 166 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 85, 15 |
Conread position: | 312-538 |
Cow position: | chr1:78131065-78131290 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 180, 45 |
Conread position: | 314-504 |
Cow position: | chr1:42182799-42182612 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 134 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 159, 17 |
Conread position: | 323-434 |
Cow position: | chr1:95606611-95606500 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 323-442 |
Cow position: | chr1:32350368-32350487 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 323-455 |
Cow position: | chr1:54440696-54440564 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 323-495 |
Cow position: | chr1:87946149-87946314 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 323-499 |
Cow position: | chr1:12040865-12040692 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 323-499 |
Cow position: | chr1:95425504-95425679 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 126 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 167, 0 |
Conread position: | 323-500 |
Cow position: | chr1:81234387-81234212 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 323-501 |
Cow position: | chr1:51445044-51445221 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 162, 0 |
Conread position: | 323-504 |
Cow position: | chr1:68531039-68530859 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 128 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 163, 0 |
Conread position: | 323-507 |
Cow position: | chr1:92612782-92612598 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 134 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 58, 163 |
Conread position: | 323-510 |
Cow position: | chr1:91993968-91993781 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 41, 73 |
Conread position: | 323-522 |
Cow position: | chr1:59196754-59196554 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 164, 116 |
Conread position: | 323-527 |
Cow position: | chr1:83121206-83121429 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 164 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 323-530 |
Cow position: | chr1:13787791-13787998 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 147 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 125, 70 |
Conread position: | 323-544 |
Cow position: | chr1:87742245-87742471 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 161 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 43, 73 |
Conread position: | 323-549 |
Cow position: | chr1:86397180-86397398 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 164 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 125, 41 |
Conread position: | 323-550 |
Cow position: | chr1:5653916-5654144 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 161 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 38, 73 |
Conread position: | 323-550 |
Cow position: | chr1:15488544-15488315 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 156 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 43, 73 |
Conread position: | 323-550 |
Cow position: | chr1:91788125-91788357 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 169 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 43, 73 |
Conread position: | 323-582 |
Cow position: | chr1:40217761-40217498 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 183 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 43, 72 |
Conread position: | 324-529 |
Cow position: | chr1:86644093-86644299 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 154 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 124, 71 |
Conread position: | 325-499 |
Cow position: | chr1:89839745-89839571 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 123, 71 |
Conread position: | 325-507 |
Cow position: | chr1:5303989-5304170 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 131 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 58, 147 |
Conread position: | 329-582 |
Cow position: | chr1:5179826-5179566 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 185 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 34, 67 |
Conread position: | 330-498 |
Cow position: | chr1:96658410-96658241 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 118, 31 |
Conread position: | 333-507 |
Cow position: | chr1:82516326-82516156 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 123 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 334-582 |
Cow position: | chr1:47041545-47041802 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 183 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 114, 30 |
Conread position: | 334-582 |
Cow position: | chr1:98767509-98767755 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 30, 62 |
Conread position: | 341-549 |
Cow position: | chr1:79954599-79954395 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 151 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 107, 129 |
Conread position: | 347-481 |
Cow position: | chr1:100753340-100753474 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 347-582 |
Cow position: | chr1:61099221-61098980 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 170 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 62, 48 |
Conread position: | 354-505 |
Cow position: | chr1:92260234-92260085 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 66, 17 |
Conread position: | 366-499 |
Cow position: | chr1:79626550-79626682 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 124, 0 |
Show alignments to all cow chromosomes.