Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 301-507 |
| Cow position: | chr11:71359626-71359426 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 311-547 |
| Cow position: | chr11:33769426-33769193 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 316-496 |
| Cow position: | chr11:2890542-2890361 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 320-500 |
| Cow position: | chr11:40535870-40535692 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 76 |
| Conread position: | 321-526 |
| Cow position: | chr11:31813551-31813342 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 321-534 |
| Cow position: | chr11:52803363-52803569 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 127, 71 |
| Conread position: | 323-485 |
| Cow position: | chr11:13049739-13049895 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 323-485 |
| Cow position: | chr11:32019142-32018982 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 323-497 |
| Cow position: | chr11:12876725-12876899 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-497 |
| Cow position: | chr11:73440389-73440563 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-498 |
| Cow position: | chr11:38210299-38210472 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 323-499 |
| Cow position: | chr11:84808112-84807937 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 323-500 |
| Cow position: | chr11:65878841-65879020 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 170 |
| Conread position: | 323-501 |
| Cow position: | chr11:82292037-82291860 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 323-502 |
| Cow position: | chr11:48257596-48257418 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 168, 72 |
| Conread position: | 323-504 |
| Cow position: | chr11:44547409-44547592 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 323-536 |
| Cow position: | chr11:10980317-10980529 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 323-550 |
| Cow position: | chr11:64039476-64039705 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 323-573 |
| Cow position: | chr11:38119527-38119776 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 324-464 |
| Cow position: | chr11:52509184-52509044 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-500 |
| Cow position: | chr11:8555506-8555678 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 325-505 |
| Cow position: | chr11:4645123-4645306 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 169 |
| Conread position: | 325-507 |
| Cow position: | chr11:32816241-32816059 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-522 |
| Cow position: | chr11:38050267-38050465 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 325-522 |
| Cow position: | chr11:38123583-38123386 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 178, 136 |
| Conread position: | 325-582 |
| Cow position: | chr11:31661045-31660779 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 334-485 |
| Cow position: | chr11:65995326-65995176 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 337-501 |
| Cow position: | chr11:37006084-37005922 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 338-515 |
| Cow position: | chr11:8222233-8222409 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 340-547 |
| Cow position: | chr11:79946588-79946376 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 108, 47 |
| Conread position: | 344-530 |
| Cow position: | chr11:7406297-7406107 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 382-549 |
| Cow position: | chr11:58003102-58003271 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 101, 139 |
Show alignments to all cow chromosomes.