Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 298-501 |
| Cow position: | chr12:4354566-4354763 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 105 |
| Conread position: | 309-582 |
| Cow position: | chr12:6926797-6926519 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 139, 25 |
| Conread position: | 310-521 |
| Cow position: | chr12:17710256-17710054 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 311-495 |
| Cow position: | chr12:22131132-22131312 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 323-549 |
| Cow position: | chr12:22211660-22211434 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 323-550 |
| Cow position: | chr12:29013698-29013471 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 323-576 |
| Cow position: | chr12:3374832-3375067 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 54, 103 |
| Conread position: | 324-501 |
| Cow position: | chr12:29442351-29442176 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 324-521 |
| Cow position: | chr12:1013200-1013012 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 324-521 |
| Cow position: | chr12:21573119-21573317 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 95 |
| Conread position: | 324-525 |
| Cow position: | chr12:37705733-37705935 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 324-525 |
| Cow position: | chr12:37753442-37753236 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 325-483 |
| Cow position: | chr12:18051273-18051115 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-503 |
| Cow position: | chr12:16845807-16845984 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 325-507 |
| Cow position: | chr12:5573258-5573435 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 329-497 |
| Cow position: | chr12:28244196-28244030 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 334-514 |
| Cow position: | chr12:7570797-7570975 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 335-549 |
| Cow position: | chr12:31837650-31837863 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 130, 57 |
| Conread position: | 353-549 |
| Cow position: | chr12:27604332-27604526 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 11 |
| Conread position: | 370-503 |
| Cow position: | chr12:25381731-25381864 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 116 |
Show alignments to all cow chromosomes.