Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 306-456 |
| Cow position: | chr15:4311844-4311993 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 308-563 |
| Cow position: | chr15:10315790-10316044 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 319-500 |
| Cow position: | chr15:25432165-25431985 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 320-495 |
| Cow position: | chr15:11806074-11806249 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 138 |
| Conread position: | 320-495 |
| Cow position: | chr15:20550917-20550744 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 323-455 |
| Cow position: | chr15:50258695-50258826 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 323-456 |
| Cow position: | chr15:22909623-22909756 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-461 |
| Cow position: | chr15:38451421-38451557 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 323-499 |
| Cow position: | chr15:42240387-42240564 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 108, 165 |
| Conread position: | 323-507 |
| Cow position: | chr15:695517-695336 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 323-507 |
| Cow position: | chr15:7865397-7865215 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 323-507 |
| Cow position: | chr15:42639346-42639528 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 323-508 |
| Cow position: | chr15:33701346-33701534 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 323-521 |
| Cow position: | chr15:50276207-50276010 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 323-526 |
| Cow position: | chr15:32431495-32431292 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 323-549 |
| Cow position: | chr15:810479-810252 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 125, 52 |
| Conread position: | 323-550 |
| Cow position: | chr15:430912-431140 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 323-571 |
| Cow position: | chr15:38863268-38863515 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 324-485 |
| Cow position: | chr15:39919914-39919756 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 324-499 |
| Cow position: | chr15:6161333-6161509 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 120, 44 |
| Conread position: | 324-526 |
| Cow position: | chr15:40220453-40220658 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 124, 65 |
| Conread position: | 325-503 |
| Cow position: | chr15:16335565-16335742 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 326-500 |
| Cow position: | chr15:29929308-29929481 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 332-501 |
| Cow position: | chr15:38114534-38114701 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 334-549 |
| Cow position: | chr15:6148006-6148216 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 30 |
| Conread position: | 339-455 |
| Cow position: | chr15:15209263-15209147 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-582 |
| Cow position: | chr15:29922039-29922259 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 130, 74 |
Show alignments to all cow chromosomes.