Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 280-495 |
| Cow position: | chr16:53196469-53196683 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 29 |
| Conread position: | 285-525 |
| Cow position: | chr16:14655007-14655251 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 24, 112 |
| Conread position: | 307-515 |
| Cow position: | chr16:6362065-6362275 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 141, 18 |
| Conread position: | 308-507 |
| Cow position: | chr16:9522191-9521992 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 14, 183 |
| Conread position: | 311-547 |
| Cow position: | chr16:12049434-12049205 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 311-550 |
| Cow position: | chr16:1405245-1405006 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 85 |
| Conread position: | 314-501 |
| Cow position: | chr16:30687369-30687190 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 314-573 |
| Cow position: | chr16:27162491-27162226 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 110, 212 |
| Conread position: | 320-503 |
| Cow position: | chr16:6531702-6531884 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 323-442 |
| Cow position: | chr16:9749943-9749826 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 323-451 |
| Cow position: | chr16:35230931-35231056 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 323-497 |
| Cow position: | chr16:47993350-47993178 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 46 |
| Conread position: | 323-507 |
| Cow position: | chr16:33694138-33693962 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 323-525 |
| Cow position: | chr16:23968243-23968447 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 323-526 |
| Cow position: | chr16:34779707-34779912 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 323-526 |
| Cow position: | chr16:41067925-41068128 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 323-548 |
| Cow position: | chr16:48800334-48800550 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 323-550 |
| Cow position: | chr16:25153948-25153717 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 324-582 |
| Cow position: | chr16:11108142-11107878 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 325-507 |
| Cow position: | chr16:48940929-48940753 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 325-528 |
| Cow position: | chr16:4863514-4863713 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 143 |
| Conread position: | 327-506 |
| Cow position: | chr16:33517785-33517603 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 334-582 |
| Cow position: | chr16:24048876-24049144 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 29, 62 |
| Conread position: | 344-549 |
| Cow position: | chr16:45412230-45412032 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 199, 21 |
| Conread position: | 344-560 |
| Cow position: | chr16:19943805-19943585 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 142, 21 |
| Conread position: | 347-500 |
| Cow position: | chr16:9826621-9826469 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 350-549 |
| Cow position: | chr16:12643067-12643269 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 352-501 |
| Cow position: | chr16:49166243-49166095 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 134, 0 |
Show alignments to all cow chromosomes.