Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 306-490 |
| Cow position: | chr29:16930518-16930335 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 321-500 |
| Cow position: | chr29:33628171-33628349 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 166, 40 |
| Conread position: | 323-447 |
| Cow position: | chr29:906340-906216 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-455 |
| Cow position: | chr29:17613835-17613703 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-480 |
| Cow position: | chr29:43310025-43309865 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 323-493 |
| Cow position: | chr29:2294136-2294300 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 323-497 |
| Cow position: | chr29:3751500-3751328 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 323-499 |
| Cow position: | chr29:2495984-2496164 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 323-526 |
| Cow position: | chr29:31825983-31826190 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 323-550 |
| Cow position: | chr29:29451411-29451636 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 323-582 |
| Cow position: | chr29:5703990-5703728 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 323-582 |
| Cow position: | chr29:18493326-18493585 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 324-547 |
| Cow position: | chr29:2541843-2542061 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 325-504 |
| Cow position: | chr29:33610325-33610503 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 325-516 |
| Cow position: | chr29:31653524-31653336 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 334-564 |
| Cow position: | chr29:33004016-33003789 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 342-551 |
| Cow position: | chr29:23136636-23136844 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 344-549 |
| Cow position: | chr29:18696690-18696896 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 344-550 |
| Cow position: | chr29:5580270-5580067 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 347-550 |
| Cow position: | chr29:4244923-4244716 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 348-508 |
| Cow position: | chr29:25713454-25713616 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 354-501 |
| Cow position: | chr29:43079080-43079226 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 364-550 |
| Cow position: | chr29:26009424-26009239 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 140, 32 |
| Conread position: | 376-550 |
| Cow position: | chr29:20529010-20528839 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 18 |
Show alignments to all cow chromosomes.