Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 296-528 |
| Cow position: | chr3:34590378-34590145 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 152, 79 |
| Conread position: | 307-499 |
| Cow position: | chr3:60019108-60018913 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 310-506 |
| Cow position: | chr3:47695766-47695961 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 310-520 |
| Cow position: | chr3:2657699-2657911 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 310-550 |
| Cow position: | chr3:26585290-26585050 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 311-498 |
| Cow position: | chr3:39963552-39963738 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 311-526 |
| Cow position: | chr3:2666812-2667032 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 55, 213 |
| Conread position: | 317-507 |
| Cow position: | chr3:23086401-23086589 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 321-500 |
| Cow position: | chr3:10152057-10151881 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 135 |
| Conread position: | 323-436 |
| Cow position: | chr3:45196161-45196274 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-496 |
| Cow position: | chr3:2887314-2887145 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 323-498 |
| Cow position: | chr3:12130293-12130122 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 323-500 |
| Cow position: | chr3:71209673-71209498 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 323-500 |
| Cow position: | chr3:84393804-84393980 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 323-501 |
| Cow position: | chr3:33598674-33598847 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 323-501 |
| Cow position: | chr3:42062524-42062697 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 323-542 |
| Cow position: | chr3:7834893-7835113 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 125, 69 |
| Conread position: | 323-550 |
| Cow position: | chr3:32157314-32157541 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 323-550 |
| Cow position: | chr3:58238183-58237962 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 323-582 |
| Cow position: | chr3:25709804-25709542 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 125, 68 |
| Conread position: | 324-582 |
| Cow position: | chr3:29147877-29147618 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 115 |
| Conread position: | 324-582 |
| Cow position: | chr3:58841645-58841386 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 325-503 |
| Cow position: | chr3:59560275-59560097 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 339-550 |
| Cow position: | chr3:80385917-80385706 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 341-501 |
| Cow position: | chr3:34265261-34265102 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 349-550 |
| Cow position: | chr3:83600060-83599861 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 370-504 |
| Cow position: | chr3:66133621-66133488 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 371-500 |
| Cow position: | chr3:39155168-39155296 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 410-582 |
| Cow position: | chr3:36786476-36786644 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 413-557 |
| Cow position: | chr3:25728846-25728700 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 121 |
Show alignments to all cow chromosomes.