Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 290-548 |
| Cow position: | chr5:57746714-57746972 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 304-542 |
| Cow position: | chr5:9682914-9683155 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 306-455 |
| Cow position: | chr5:57094457-57094307 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 306-582 |
| Cow position: | chr5:38175479-38175757 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 143, 58 |
| Conread position: | 314-500 |
| Cow position: | chr5:69534825-69535010 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 314-547 |
| Cow position: | chr5:44693620-44693851 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 134, 51 |
| Conread position: | 321-507 |
| Cow position: | chr5:17682378-17682564 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 166, 18 |
| Conread position: | 323-455 |
| Cow position: | chr5:38411168-38411034 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 323-499 |
| Cow position: | chr5:23757884-23758058 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 323-500 |
| Cow position: | chr5:46413033-46413208 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 323-513 |
| Cow position: | chr5:56828434-56828243 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 172, 64 |
| Conread position: | 323-526 |
| Cow position: | chr5:67475373-67475579 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 323-541 |
| Cow position: | chr5:29667193-29667411 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 323-550 |
| Cow position: | chr5:26137142-26137376 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 324-500 |
| Cow position: | chr5:53731572-53731744 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 325-490 |
| Cow position: | chr5:22312671-22312836 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-504 |
| Cow position: | chr5:50226289-50226112 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 326-496 |
| Cow position: | chr5:25632643-25632815 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 334-502 |
| Cow position: | chr5:47700441-47700609 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 114, 58 |
| Conread position: | 334-550 |
| Cow position: | chr5:40746169-40745951 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 62 |
| Conread position: | 341-549 |
| Cow position: | chr5:37471159-37470951 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 109, 23 |
| Conread position: | 344-550 |
| Cow position: | chr5:53020275-53020474 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 104, 47 |
| Conread position: | 354-547 |
| Cow position: | chr5:57702516-57702321 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 182 |
| Conread position: | 390-573 |
| Cow position: | chr5:42005202-42005020 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.