Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 309-500 |
| Cow position: | chr6:14916338-14916529 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 171, 101 |
| Conread position: | 309-526 |
| Cow position: | chr6:53515621-53515407 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 57, 86 |
| Conread position: | 322-550 |
| Cow position: | chr6:61567121-61566897 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 322-582 |
| Cow position: | chr6:684912-684647 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 162, 43 |
| Conread position: | 323-469 |
| Cow position: | chr6:11945466-11945321 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 323-499 |
| Cow position: | chr6:21263140-21262966 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 323-500 |
| Cow position: | chr6:30504795-30504971 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 136, 130 |
| Conread position: | 323-529 |
| Cow position: | chr6:63060283-63060077 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 125, 41 |
| Conread position: | 323-557 |
| Cow position: | chr6:14442544-14442308 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 323-564 |
| Cow position: | chr6:10569433-10569672 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 323-582 |
| Cow position: | chr6:249546-249287 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 183, 55 |
| Conread position: | 323-582 |
| Cow position: | chr6:3417464-3417728 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 324-520 |
| Cow position: | chr6:60322033-60321837 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 167 |
| Conread position: | 324-582 |
| Cow position: | chr6:682636-682900 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 170, 41 |
| Conread position: | 328-582 |
| Cow position: | chr6:3915224-3914968 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 199, 77 |
| Conread position: | 331-501 |
| Cow position: | chr6:661131-660962 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 334-543 |
| Cow position: | chr6:51100730-51100934 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 114, 151 |
| Conread position: | 335-526 |
| Cow position: | chr6:19423810-19423616 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 28, 187 |
| Conread position: | 335-549 |
| Cow position: | chr6:56397179-56397401 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 193 |
| Conread position: | 344-528 |
| Cow position: | chr6:61433390-61433203 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 21 |
| Conread position: | 344-549 |
| Cow position: | chr6:414609-414812 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 152, 51 |
| Conread position: | 359-485 |
| Cow position: | chr6:34620747-34620621 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 371-582 |
| Cow position: | chr6:419092-418867 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 373-504 |
| Cow position: | chr6:58070437-58070569 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 374-516 |
| Cow position: | chr6:23637934-23637789 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 84 |
Show alignments to all cow chromosomes.