Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 297-575 |
| Cow position: | chr9:1865189-1864909 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 73 |
| Conread position: | 314-499 |
| Cow position: | chr9:44974250-44974433 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 314-501 |
| Cow position: | chr9:19453335-19453150 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 323-434 |
| Cow position: | chr9:18403995-18403884 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-455 |
| Cow position: | chr9:18155770-18155639 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 323-504 |
| Cow position: | chr9:6364368-6364548 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 323-507 |
| Cow position: | chr9:8874380-8874557 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 323-507 |
| Cow position: | chr9:53498635-53498452 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 153, 22 |
| Conread position: | 323-508 |
| Cow position: | chr9:54499593-54499405 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 165 |
| Conread position: | 323-516 |
| Cow position: | chr9:58127505-58127698 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 188, 137 |
| Conread position: | 323-526 |
| Cow position: | chr9:43433740-43433945 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 323-549 |
| Cow position: | chr9:48393882-48393656 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 164 |
| Conread position: | 323-550 |
| Cow position: | chr9:7309835-7309608 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 181, 41 |
| Conread position: | 324-485 |
| Cow position: | chr9:40996046-40995888 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 324-498 |
| Cow position: | chr9:7310775-7310948 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 324-501 |
| Cow position: | chr9:3040581-3040405 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 325-501 |
| Cow position: | chr9:33225739-33225914 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 325-501 |
| Cow position: | chr9:42787568-42787744 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 331-496 |
| Cow position: | chr9:9691775-9691939 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 350-498 |
| Cow position: | chr9:56594727-56594582 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.