Cow genome map
| Conread name: | Tra1-TCH01C020034 |
| Conread position: | 308-493 |
| Cow position: | chrX:45755374-45755190 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 140, 56 |
| Conread position: | 309-549 |
| Cow position: | chrX:44749470-44749713 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 139, 225 |
| Conread position: | 309-582 |
| Cow position: | chrX:29364724-29365003 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 6, 87 |
| Conread position: | 311-582 |
| Cow position: | chrX:1154871-1155147 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 321-499 |
| Cow position: | chrX:43682667-43682485 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 321-550 |
| Cow position: | chrX:16185751-16185977 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 43 |
| Conread position: | 323-499 |
| Cow position: | chrX:4505179-4505004 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 323-521 |
| Cow position: | chrX:44121760-44121962 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 323-524 |
| Cow position: | chrX:29775916-29775715 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 174, 11 |
| Conread position: | 323-547 |
| Cow position: | chrX:25435769-25435548 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 125, 21 |
| Conread position: | 323-570 |
| Cow position: | chrX:10426164-10426420 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 324-514 |
| Cow position: | chrX:39484967-39485153 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 47 |
| Conread position: | 324-521 |
| Cow position: | chrX:29816329-29816528 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 324-582 |
| Cow position: | chrX:12260344-12260086 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 124, 42 |
| Conread position: | 325-530 |
| Cow position: | chrX:47177003-47176791 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 331-505 |
| Cow position: | chrX:21245452-21245276 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 334-582 |
| Cow position: | chrX:5762184-5762432 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 335-485 |
| Cow position: | chrX:30096408-30096559 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 347-526 |
| Cow position: | chrX:29536117-29535937 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 372-526 |
| Cow position: | chrX:18860068-18859913 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 75, 23 |
Show alignments to all cow chromosomes.