Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 175-812
Cow position:
Alignm length: 643
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 188

Conread position: 176-470
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 46, 189

Conread position: 176-557
Cow position:
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-590
Cow position:
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 71

Conread position: 176-637
Cow position:
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 149

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 176-812
Cow position:
Alignm length: 657
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 97

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 188

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 183

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 187

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 177-329
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 11

Conread position: 177-651
Cow position:
Alignm length: 484
Alignm identity: 315
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 90

Conread position: 177-812
Cow position:
Alignm length: 643
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 177-812
Cow position:
Alignm length: 643
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 177-812
Cow position:
Alignm length: 644
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 177-812
Cow position:
Alignm length: 643
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 188

Conread position: 178-330
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 75

Conread position: 178-380
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 128

Conread position: 178-382
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 15

Conread position: 178-385
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 44, 177

Conread position: 178-430
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 78

Conread position: 178-456
Cow position:
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 179

Conread position: 178-464
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 203, 50

Conread position: 178-517
Cow position:
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 173

Conread position: 178-533
Cow position:
Alignm length: 360
Alignm identity: 241
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 85

Conread position: 178-542
Cow position:
Alignm length: 369
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 122

Conread position: 178-600
Cow position:
Alignm length: 429
Alignm identity: 288
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 123

Conread position: 178-615
Cow position:
Alignm length: 448
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-668
Cow position:
Alignm length: 508
Alignm identity: 313
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 52, 263

Conread position: 178-686
Cow position:
Alignm length: 516
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 181

Conread position: 178-787
Cow position:
Alignm length: 619
Alignm identity: 396
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 12

Conread position: 178-788
Cow position:
Alignm length: 619
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 130

Conread position: 178-789
Cow position:
Alignm length: 614
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 14

Conread position: 178-794
Cow position:
Alignm length: 624
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-806
Cow position:
Alignm length: 635
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-809
Cow position:
Alignm length: 643
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 174

Conread position: 178-809
Cow position:
Alignm length: 639
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-810
Cow position:
Alignm length: 647
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 178-810
Cow position:
Alignm length: 641
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 185

Conread position: 178-810
Cow position:
Alignm length: 638
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 156

Conread position: 178-810
Cow position:
Alignm length: 641
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-810
Cow position:
Alignm length: 656
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 172

Conread position: 178-811
Cow position:
Alignm length: 654
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 178-812
Cow position:
Alignm length: 658
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 186

Conread position: 178-812
Cow position:
Alignm length: 639
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 80

Conread position: 178-812
Cow position:
Alignm length: 639
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 51

Conread position: 178-812
Cow position:
Alignm length: 639
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 52

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 178-812
Cow position:
Alignm length: 648
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 25

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-812
Cow position:
Alignm length: 648
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 182

Conread position: 180-812
Cow position:
Alignm length: 641
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 179

Conread position: 180-812
Cow position:
Alignm length: 640
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 8

Conread position: 181-514
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 48, 100

Conread position: 181-587
Cow position:
Alignm length: 419
Alignm identity: 272
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 183

Conread position: 181-787
Cow position:
Alignm length: 618
Alignm identity: 376
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 62

Conread position: 183-292
Cow position:
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 183-316
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 183-372
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 137

Conread position: 183-460
Cow position:
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 137

Conread position: 183-501
Cow position:
Alignm length: 325
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 89

Conread position: 183-691
Cow position:
Alignm length: 514
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 183-810
Cow position:
Alignm length: 633
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 8

Conread position: 183-810
Cow position:
Alignm length: 637
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 151

Conread position: 183-812
Cow position:
Alignm length: 639
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 184-298
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 184-810
Cow position:
Alignm length: 634
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 83

Conread position: 186-480
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 177

Conread position: 187-580
Cow position:
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 172

Conread position: 188-812
Cow position:
Alignm length: 636
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 15

Conread position: 191-728
Cow position:
Alignm length: 548
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 105

Conread position: 196-625
Cow position:
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 153

Conread position: 196-810
Cow position:
Alignm length: 631
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 176

Conread position: 199-811
Cow position:
Alignm length: 626
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 168

Conread position: 205-635
Cow position:
Alignm length: 455
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 115

Conread position: 218-728
Cow position:
Alignm length: 518
Alignm identity: 333
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 32

Conread position: 221-699
Cow position:
Alignm length: 489
Alignm identity: 302
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 60

Conread position: 222-812
Cow position:
Alignm length: 598
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 128

Conread position: 228-666
Cow position:
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 36

Conread position: 232-787
Cow position:
Alignm length: 561
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 125

Conread position: 237-497
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 49

Conread position: 242-459
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 140, 11

Conread position: 262-580
Cow position:
Alignm length: 325
Alignm identity: 219
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 115, 41

Conread position: 265-812
Cow position:
Alignm length: 554
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 70

Conread position: 273-801
Cow position:
Alignm length: 531
Alignm identity: 355
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 113, 17

Conread position: 288-810
Cow position:
Alignm length: 528
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 73

Conread position: 292-529
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 51, 73

Conread position: 347-812
Cow position:
Alignm length: 471
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 15

Conread position: 349-795
Cow position:
Alignm length: 451
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 12

Conread position: 366-614
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 34

Conread position: 367-491
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 12, 33

Conread position: 371-812
Cow position:
Alignm length: 447
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 401-812
Cow position:
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 61

Conread position: 409-812
Cow position:
Alignm length: 404
Alignm identity: 270
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 418-656
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 71

Conread position: 445-812
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 41

Conread position: 446-812
Cow position:
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 43

Conread position: 449-609
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 37

Conread position: 457-719
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 29

Conread position: 464-715
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 22

Conread position: 464-812
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 70, 25

Conread position: 475-812
Cow position:
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 496-810
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 507-804
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 94

Conread position: 593-757
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 46

Conread position: 636-812
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 166

Show alignments to all cow chromosomes.