Cow genome map
| Conread name: | Tra1-TCH01C040031 |
| Conread position: | 171-812 |
| Cow position: | chr11:19102523-19103167 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 192 |
| Conread position: | 173-464 |
| Cow position: | chr11:52886542-52886822 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 129 |
| Conread position: | 175-330 |
| Cow position: | chr11:7316829-7316675 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 99 |
| Conread position: | 175-810 |
| Cow position: | chr11:87127797-87127165 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 125 |
| Conread position: | 176-689 |
| Cow position: | chr11:4270903-4271424 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 193 |
| Conread position: | 176-766 |
| Cow position: | chr11:8244662-8244087 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 176-810 |
| Cow position: | chr11:41170734-41171372 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr11:4027605-4028231 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 158 |
| Conread position: | 176-812 |
| Cow position: | chr11:10847400-10846764 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 176-812 |
| Cow position: | chr11:11988065-11987438 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 176-812 |
| Cow position: | chr11:23877260-23876623 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 130 |
| Conread position: | 176-812 |
| Cow position: | chr11:24393275-24392645 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr11:29668673-29669310 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 176-812 |
| Cow position: | chr11:38835473-38836098 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 176-812 |
| Cow position: | chr11:43514672-43515310 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr11:44157295-44157914 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 176-812 |
| Cow position: | chr11:71329602-71328964 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr11:72110007-72110640 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 177-812 |
| Cow position: | chr11:28054643-28055275 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 178 |
| Conread position: | 177-812 |
| Cow position: | chr11:37093105-37093743 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 178-307 |
| Cow position: | chr11:76374245-76374374 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 178-348 |
| Cow position: | chr11:9220164-9220336 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 44, 137 |
| Conread position: | 178-352 |
| Cow position: | chr11:53432110-53432286 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 178-357 |
| Cow position: | chr11:33194597-33194778 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 178-369 |
| Cow position: | chr11:4065273-4065470 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 184 |
| Conread position: | 178-423 |
| Cow position: | chr11:8519945-8519703 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 178-478 |
| Cow position: | chr11:31413977-31414267 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 204, 31 |
| Conread position: | 178-549 |
| Cow position: | chr11:5343261-5343635 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-564 |
| Cow position: | chr11:37065162-37065555 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 184 |
| Conread position: | 178-575 |
| Cow position: | chr11:10090292-10089892 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-624 |
| Cow position: | chr11:8283031-8282586 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 178-641 |
| Cow position: | chr11:45111325-45110851 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 229 |
| Conread position: | 178-668 |
| Cow position: | chr11:61401095-61401573 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-684 |
| Cow position: | chr11:9606622-9607127 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 120 |
| Conread position: | 178-692 |
| Cow position: | chr11:7113550-7113041 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 178-704 |
| Cow position: | chr11:44231070-44230560 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 347 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 178-729 |
| Cow position: | chr11:75920358-75919826 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 178-769 |
| Cow position: | chr11:12351109-12351701 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 183 |
| Conread position: | 178-806 |
| Cow position: | chr11:1496118-1496735 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-806 |
| Cow position: | chr11:3492967-3492344 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-809 |
| Cow position: | chr11:36744224-36744855 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr11:15983580-15982967 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr11:19064293-19064929 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-810 |
| Cow position: | chr11:32450823-32450188 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 159 |
| Conread position: | 178-810 |
| Cow position: | chr11:42429289-42428655 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 135 |
| Conread position: | 178-810 |
| Cow position: | chr11:52419344-52418714 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr11:57628090-57628726 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-812 |
| Cow position: | chr11:8261748-8262375 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 178-812 |
| Cow position: | chr11:8887202-8887831 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 133 |
| Conread position: | 178-812 |
| Cow position: | chr11:17220259-17220886 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 189 |
| Conread position: | 178-812 |
| Cow position: | chr11:21467033-21466402 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 183 |
| Conread position: | 178-812 |
| Cow position: | chr11:25527514-25526896 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 178-812 |
| Cow position: | chr11:28063632-28063009 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 178-812 |
| Cow position: | chr11:34020846-34020228 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-812 |
| Cow position: | chr11:37491690-37492325 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 178-812 |
| Cow position: | chr11:54209568-54208946 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 178-812 |
| Cow position: | chr11:67846615-67847248 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-812 |
| Cow position: | chr11:85393855-85394490 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 179-812 |
| Cow position: | chr11:12358470-12359100 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 184 |
| Conread position: | 179-812 |
| Cow position: | chr11:26124976-26125609 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 179 |
| Conread position: | 180-812 |
| Cow position: | chr11:9659433-9660075 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 192 |
| Conread position: | 181-357 |
| Cow position: | chr11:12093510-12093332 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 181-812 |
| Cow position: | chr11:58134340-58133677 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 199 |
| Conread position: | 183-354 |
| Cow position: | chr11:77235666-77235493 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 183-390 |
| Cow position: | chr11:38505654-38505862 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 39, 121 |
| Conread position: | 183-473 |
| Cow position: | chr11:73477259-73476968 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 176 |
| Conread position: | 183-530 |
| Cow position: | chr11:64045949-64045602 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 176 |
| Conread position: | 183-779 |
| Cow position: | chr11:17107735-17108334 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 183-809 |
| Cow position: | chr11:20920794-20921424 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 183-810 |
| Cow position: | chr11:77728569-77729205 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 184-810 |
| Cow position: | chr11:37477169-37477795 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 175 |
| Conread position: | 184-810 |
| Cow position: | chr11:67450448-67449816 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 184-812 |
| Cow position: | chr11:28229803-28230423 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 179 |
| Conread position: | 185-797 |
| Cow position: | chr11:53287506-53288121 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 178 |
| Conread position: | 185-810 |
| Cow position: | chr11:4041127-4041739 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 127 |
| Conread position: | 191-410 |
| Cow position: | chr11:9734705-9734924 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 196-632 |
| Cow position: | chr11:26565783-26566218 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 285 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 57 |
| Conread position: | 198-424 |
| Cow position: | chr11:17280362-17280585 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 182, 32 |
| Conread position: | 198-507 |
| Cow position: | chr11:40776606-40776915 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 200-812 |
| Cow position: | chr11:9157499-9158095 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 203-811 |
| Cow position: | chr11:43732335-43731746 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 52 |
| Conread position: | 205-812 |
| Cow position: | chr11:30125333-30125915 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 205-812 |
| Cow position: | chr11:30305158-30304586 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 140 |
| Conread position: | 208-574 |
| Cow position: | chr11:66726389-66726023 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 212-812 |
| Cow position: | chr11:44860607-44861208 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 152 |
| Conread position: | 221-510 |
| Cow position: | chr11:47761032-47761306 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 161, 117 |
| Conread position: | 221-810 |
| Cow position: | chr11:63659670-63660263 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 140 |
| Conread position: | 224-812 |
| Cow position: | chr11:10210054-10210639 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 134 |
| Conread position: | 225-732 |
| Cow position: | chr11:50028779-50029293 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 126 |
| Conread position: | 228-471 |
| Cow position: | chr11:3240549-3240310 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 153, 54 |
| Conread position: | 228-612 |
| Cow position: | chr11:81852728-81853103 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 129 |
| Conread position: | 245-612 |
| Cow position: | chr11:10050006-10049644 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 8 |
| Conread position: | 258-712 |
| Cow position: | chr11:32271835-32272282 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 124, 73 |
| Conread position: | 261-812 |
| Cow position: | chr11:13581115-13581654 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 355 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 49, 103 |
| Conread position: | 261-812 |
| Cow position: | chr11:29233784-29234322 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 100 |
| Conread position: | 262-516 |
| Cow position: | chr11:32685154-32684907 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 269-810 |
| Cow position: | chr11:44495732-44496260 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 270-607 |
| Cow position: | chr11:24243320-24242998 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 86 |
| Conread position: | 279-470 |
| Cow position: | chr11:7688463-7688276 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 100, 82 |
| Conread position: | 282-812 |
| Cow position: | chr11:15998743-15998211 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 79 |
| Conread position: | 311-809 |
| Cow position: | chr11:10217748-10218231 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 337-700 |
| Cow position: | chr11:28050000-28050350 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 341-811 |
| Cow position: | chr11:9580746-9581216 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 361-808 |
| Cow position: | chr11:32071875-32071435 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 304 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 163, 46 |
| Conread position: | 404-562 |
| Cow position: | chr11:46962692-46962847 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 130, 50 |
| Conread position: | 404-720 |
| Cow position: | chr11:77235495-77235173 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 85 |
| Conread position: | 407-810 |
| Cow position: | chr11:9736226-9736624 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 82 |
| Conread position: | 454-812 |
| Cow position: | chr11:31414560-31414916 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 456-812 |
| Cow position: | chr11:7687596-7687233 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 32 |
| Conread position: | 456-812 |
| Cow position: | chr11:76374803-76375148 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 458-795 |
| Cow position: | chr11:11126590-11126261 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 482-782 |
| Cow position: | chr11:17280593-17280884 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 56, 7 |
| Conread position: | 489-812 |
| Cow position: | chr11:7072828-7073144 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 221 |
| Conread position: | 533-810 |
| Cow position: | chr11:40777132-40777410 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 268 |
| Conread position: | 546-812 |
| Cow position: | chr11:52462693-52462415 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 556-812 |
| Cow position: | chr11:12093329-12093080 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 5, 60 |
| Conread position: | 560-810 |
| Cow position: | chr11:31925773-31925522 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 117 |
| Conread position: | 572-810 |
| Cow position: | chr11:33195059-33195291 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 149, 53 |
| Conread position: | 583-812 |
| Cow position: | chr11:9220468-9220695 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 604-809 |
| Cow position: | chr11:66726024-66725827 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 608-812 |
| Cow position: | chr11:44507692-44507492 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 629-812 |
| Cow position: | chr11:24677560-24677376 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 646-812 |
| Cow position: | chr11:53432283-53432450 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.