Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 171-812
Cow position:
Alignm length: 649
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 192

Conread position: 173-464
Cow position:
Alignm length: 296
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 129

Conread position: 175-330
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 99

Conread position: 175-810
Cow position:
Alignm length: 644
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 125

Conread position: 176-689
Cow position:
Alignm length: 530
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 193

Conread position: 176-766
Cow position:
Alignm length: 599
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 115

Conread position: 176-810
Cow position:
Alignm length: 644
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 158

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 113

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 71

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 130

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 75

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 74

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 64

Conread position: 176-812
Cow position:
Alignm length: 647
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 177-812
Cow position:
Alignm length: 644
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 178

Conread position: 177-812
Cow position:
Alignm length: 643
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 178-307
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 38

Conread position: 178-348
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 137

Conread position: 178-352
Cow position:
Alignm length: 177
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 178-357
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 178-369
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 184

Conread position: 178-423
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 51, 16

Conread position: 178-478
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 204, 31

Conread position: 178-549
Cow position:
Alignm length: 378
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-564
Cow position:
Alignm length: 399
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 184

Conread position: 178-575
Cow position:
Alignm length: 405
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-624
Cow position:
Alignm length: 453
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 60

Conread position: 178-641
Cow position:
Alignm length: 480
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 229

Conread position: 178-668
Cow position:
Alignm length: 497
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-684
Cow position:
Alignm length: 514
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 120

Conread position: 178-692
Cow position:
Alignm length: 519
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 101

Conread position: 178-704
Cow position:
Alignm length: 535
Alignm identity: 347
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 11, 26

Conread position: 178-729
Cow position:
Alignm length: 558
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 81

Conread position: 178-769
Cow position:
Alignm length: 601
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-806
Cow position:
Alignm length: 634
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-806
Cow position:
Alignm length: 633
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-809
Cow position:
Alignm length: 639
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 159

Conread position: 178-810
Cow position:
Alignm length: 647
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 133

Conread position: 178-812
Cow position:
Alignm length: 648
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 189

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 183

Conread position: 178-812
Cow position:
Alignm length: 647
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 145

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 122

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-812
Cow position:
Alignm length: 648
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 104

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 95

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 179-812
Cow position:
Alignm length: 641
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 184

Conread position: 179-812
Cow position:
Alignm length: 640
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 179

Conread position: 180-812
Cow position:
Alignm length: 651
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 192

Conread position: 181-357
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 181-812
Cow position:
Alignm length: 670
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 199

Conread position: 183-354
Cow position:
Alignm length: 174
Alignm identity: 139
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 183-390
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 39, 121

Conread position: 183-473
Cow position:
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 183-530
Cow position:
Alignm length: 351
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 183-779
Cow position:
Alignm length: 604
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 183-809
Cow position:
Alignm length: 635
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 183-810
Cow position:
Alignm length: 640
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 184-810
Cow position:
Alignm length: 634
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 175

Conread position: 184-810
Cow position:
Alignm length: 641
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 138

Conread position: 184-812
Cow position:
Alignm length: 636
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 179

Conread position: 185-797
Cow position:
Alignm length: 621
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 178

Conread position: 185-810
Cow position:
Alignm length: 630
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 127

Conread position: 191-410
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 31, 82

Conread position: 196-632
Cow position:
Alignm length: 451
Alignm identity: 285
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 57

Conread position: 198-424
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 182, 32

Conread position: 198-507
Cow position:
Alignm length: 313
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 165

Conread position: 200-812
Cow position:
Alignm length: 620
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 77

Conread position: 203-811
Cow position:
Alignm length: 618
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 52

Conread position: 205-812
Cow position:
Alignm length: 613
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 24

Conread position: 205-812
Cow position:
Alignm length: 612
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 140

Conread position: 208-574
Cow position:
Alignm length: 373
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 212-812
Cow position:
Alignm length: 610
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 221-510
Cow position:
Alignm length: 292
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 161, 117

Conread position: 221-810
Cow position:
Alignm length: 597
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 140

Conread position: 224-812
Cow position:
Alignm length: 604
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 134

Conread position: 225-732
Cow position:
Alignm length: 528
Alignm identity: 336
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 83, 126

Conread position: 228-471
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 153, 54

Conread position: 228-612
Cow position:
Alignm length: 389
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 129

Conread position: 245-612
Cow position:
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 8

Conread position: 258-712
Cow position:
Alignm length: 459
Alignm identity: 278
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 73

Conread position: 261-812
Cow position:
Alignm length: 560
Alignm identity: 355
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 103

Conread position: 261-812
Cow position:
Alignm length: 558
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 100

Conread position: 262-516
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 96

Conread position: 269-810
Cow position:
Alignm length: 548
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 93

Conread position: 270-607
Cow position:
Alignm length: 341
Alignm identity: 222
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 86

Conread position: 279-470
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 82

Conread position: 282-812
Cow position:
Alignm length: 542
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 79

Conread position: 311-809
Cow position:
Alignm length: 505
Alignm identity: 318
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 31

Conread position: 337-700
Cow position:
Alignm length: 366
Alignm identity: 242
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 45, 5

Conread position: 341-811
Cow position:
Alignm length: 481
Alignm identity: 292
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 20

Conread position: 361-808
Cow position:
Alignm length: 456
Alignm identity: 304
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 163, 46

Conread position: 404-562
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 130, 50

Conread position: 404-720
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 85

Conread position: 407-810
Cow position:
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 82

Conread position: 454-812
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 32

Conread position: 456-812
Cow position:
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 32

Conread position: 456-812
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 458-795
Cow position:
Alignm length: 342
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 24

Conread position: 482-782
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 56, 7

Conread position: 489-812
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 221

Conread position: 533-810
Cow position:
Alignm length: 280
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 268

Conread position: 546-812
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 556-812
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 5, 60

Conread position: 560-810
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 117

Conread position: 572-810
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 149, 53

Conread position: 583-812
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 141, 31

Conread position: 604-809
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 608-812
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 629-812
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 15

Conread position: 646-812
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.