Cow genome map


           Conread name:
           Tra1-TCH01C040031
        

               Conread position:
               166-812
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 194
               

               Conread position:
               175-812
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 188
               

               Conread position:
               175-812
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 184
               

               Conread position:
               176-339
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               176-789
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 186
               

               Conread position:
               176-809
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 183
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 187
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 187
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 180
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 89
               

               Conread position:
               178-323
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               178-333
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               178-369
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               44, 182
               

               Conread position:
               178-369
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-413
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 182
               

               Conread position:
               178-428
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               178-434
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-443
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               250, 172
               

               Conread position:
               178-469
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               178-557
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 192
               

               Conread position:
               178-588
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 73
               

               Conread position:
               178-655
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 185
               

               Conread position:
               178-687
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 155
               

               Conread position:
               178-692
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 181
               

               Conread position:
               178-787
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 185
               

               Conread position:
               178-789
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 142
               

               Conread position:
               178-793
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 77
               

               Conread position:
               178-804
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 88
               

               Conread position:
               178-809
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 68
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 185
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 185
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 128
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 171
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 185
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 116
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 128
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 104
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 178
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 184
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 186
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 141
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 183
               

               Conread position:
               179-808
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 180
               

               Conread position:
               179-812
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               180-622
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               180-812
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 19
               

               Conread position:
               183-809
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               399
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               183-810
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 180
               

               Conread position:
               184-728
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               350
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               187-493
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 172
               

               Conread position:
               196-563
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 13
               

               Conread position:
               196-716
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               338
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               31, 138
               

               Conread position:
               197-810
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 90
               

               Conread position:
               209-648
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 139
               

               Conread position:
               221-739
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               344
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               223-767
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               356
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               87, 134
               

               Conread position:
               231-484
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               238-376
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               245-810
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 116
               

               Conread position:
               251-731
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 111
               

               Conread position:
               269-717
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 98
               

               Conread position:
               270-809
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 93
               

               Conread position:
               291-634
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               293-498
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               318-812
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 45
               

               Conread position:
               320-812
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 42
               

               Conread position:
               348-576
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               361-812
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               365-810
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               398-812
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 91
               

               Conread position:
               406-812
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               128, 13
               

               Conread position:
               469-812
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               489-810
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               517-812
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 112
               

               Conread position:
               538-812
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               572-721
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               583-810
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               187, 46
               

               Conread position:
               636-809
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               90, 100
               

               Conread position:
               670-809
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 97
               
Show alignments to all cow chromosomes.