Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 175-339
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 175-649
Cow position:
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 175-724
Cow position:
Alignm length: 560
Alignm identity: 362
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 34

Conread position: 175-812
Cow position:
Alignm length: 646
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 188

Conread position: 176-287
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 62

Conread position: 176-354
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 176-480
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 174

Conread position: 176-579
Cow position:
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 183

Conread position: 176-640
Cow position:
Alignm length: 469
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-795
Cow position:
Alignm length: 627
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 83

Conread position: 176-810
Cow position:
Alignm length: 642
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 26

Conread position: 176-812
Cow position:
Alignm length: 641
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 81

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 97

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 186

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 63

Conread position: 176-812
Cow position:
Alignm length: 656
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 193

Conread position: 177-467
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 177-810
Cow position:
Alignm length: 642
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 178-326
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 75

Conread position: 178-356
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 178-385
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 158

Conread position: 178-405
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 87

Conread position: 178-421
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 122

Conread position: 178-464
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 52, 75

Conread position: 178-493
Cow position:
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 129

Conread position: 178-520
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 181

Conread position: 178-527
Cow position:
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-549
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 21

Conread position: 178-573
Cow position:
Alignm length: 403
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-587
Cow position:
Alignm length: 421
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 132

Conread position: 178-633
Cow position:
Alignm length: 464
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 59

Conread position: 178-641
Cow position:
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-668
Cow position:
Alignm length: 496
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 178-690
Cow position:
Alignm length: 519
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 181

Conread position: 178-728
Cow position:
Alignm length: 560
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 12

Conread position: 178-765
Cow position:
Alignm length: 592
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-779
Cow position:
Alignm length: 609
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-779
Cow position:
Alignm length: 617
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 73

Conread position: 178-796
Cow position:
Alignm length: 640
Alignm identity: 407
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 82

Conread position: 178-809
Cow position:
Alignm length: 639
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 103

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 185

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 177

Conread position: 178-810
Cow position:
Alignm length: 648
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 73

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 642
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 118

Conread position: 178-812
Cow position:
Alignm length: 653
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 178-812
Cow position:
Alignm length: 642
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 182

Conread position: 178-812
Cow position:
Alignm length: 642
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 645
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 185

Conread position: 178-812
Cow position:
Alignm length: 646
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 181

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 159

Conread position: 178-812
Cow position:
Alignm length: 645
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 77

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 183

Conread position: 178-812
Cow position:
Alignm length: 642
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 116

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 87

Conread position: 178-812
Cow position:
Alignm length: 639
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 155

Conread position: 178-812
Cow position:
Alignm length: 650
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 180

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 131

Conread position: 178-812
Cow position:
Alignm length: 651
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 169

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 128

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 43

Conread position: 179-287
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 179-390
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 25

Conread position: 179-527
Cow position:
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 75

Conread position: 180-390
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 179

Conread position: 180-463
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 179

Conread position: 180-812
Cow position:
Alignm length: 642
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 181

Conread position: 182-695
Cow position:
Alignm length: 517
Alignm identity: 327
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 97

Conread position: 182-728
Cow position:
Alignm length: 559
Alignm identity: 358
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 40, 90

Conread position: 183-505
Cow position:
Alignm length: 330
Alignm identity: 218
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 6, 21

Conread position: 183-659
Cow position:
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 183-732
Cow position:
Alignm length: 556
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 184-333
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 184-790
Cow position:
Alignm length: 615
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 19

Conread position: 184-809
Cow position:
Alignm length: 636
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 184-812
Cow position:
Alignm length: 644
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 176

Conread position: 184-812
Cow position:
Alignm length: 637
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 16

Conread position: 185-495
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 175

Conread position: 185-637
Cow position:
Alignm length: 459
Alignm identity: 295
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 99

Conread position: 186-806
Cow position:
Alignm length: 625
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 173

Conread position: 196-735
Cow position:
Alignm length: 560
Alignm identity: 368
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 31, 55

Conread position: 196-769
Cow position:
Alignm length: 583
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 41

Conread position: 204-429
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 159

Conread position: 222-812
Cow position:
Alignm length: 598
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 99

Conread position: 225-733
Cow position:
Alignm length: 516
Alignm identity: 324
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 106, 10

Conread position: 226-654
Cow position:
Alignm length: 431
Alignm identity: 281
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 294, 24

Conread position: 226-666
Cow position:
Alignm length: 450
Alignm identity: 293
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 140

Conread position: 231-641
Cow position:
Alignm length: 415
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 22

Conread position: 234-637
Cow position:
Alignm length: 414
Alignm identity: 276
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 21

Conread position: 236-812
Cow position:
Alignm length: 584
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 119

Conread position: 281-810
Cow position:
Alignm length: 532
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 46

Conread position: 283-811
Cow position:
Alignm length: 538
Alignm identity: 336
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 79

Conread position: 311-782
Cow position:
Alignm length: 480
Alignm identity: 315
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 216, 31

Conread position: 311-812
Cow position:
Alignm length: 504
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 50

Conread position: 342-789
Cow position:
Alignm length: 453
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 379-692
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 20

Conread position: 388-812
Cow position:
Alignm length: 428
Alignm identity: 273
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 144, 11

Conread position: 404-699
Cow position:
Alignm length: 299
Alignm identity: 195
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 130, 48

Conread position: 439-637
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 142, 51

Conread position: 448-641
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 38

Conread position: 462-812
Cow position:
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 533-782
Cow position:
Alignm length: 252
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 82

Conread position: 559-810
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 57, 32

Conread position: 583-812
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 143, 0

Conread position: 596-812
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 130, 18

Conread position: 619-812
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 0

Conread position: 631-812
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 635-810
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 34

Conread position: 635-812
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 639-810
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.