Cow genome map
Conread name: | Tra1-TCH01C040031 |
Conread position: | 175-812 |
Cow position: | chr18:41840484-41841125 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 190 |
Conread position: | 176-279 |
Cow position: | chr18:55504656-55504758 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 86 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 176-385 |
Cow position: | chr18:27987403-27987189 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 164 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 32, 14 |
Conread position: | 176-580 |
Cow position: | chr18:14130724-14130322 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 183 |
Conread position: | 176-812 |
Cow position: | chr18:16176278-16176906 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 40 |
Conread position: | 176-812 |
Cow position: | chr18:27837977-27838601 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 186 |
Conread position: | 176-812 |
Cow position: | chr18:28973563-28974198 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 183 |
Conread position: | 176-812 |
Cow position: | chr18:36508672-36508033 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 187 |
Conread position: | 176-812 |
Cow position: | chr18:40478722-40478085 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 186 |
Conread position: | 177-554 |
Cow position: | chr18:52651258-52650890 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 137 |
Conread position: | 177-788 |
Cow position: | chr18:44601857-44601267 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 17 |
Conread position: | 177-812 |
Cow position: | chr18:14416314-14415679 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 60 |
Conread position: | 177-812 |
Cow position: | chr18:37505402-37504766 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 62 |
Conread position: | 178-306 |
Cow position: | chr18:24700775-24700907 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 178-331 |
Cow position: | chr18:56462565-56462720 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 123 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 178-358 |
Cow position: | chr18:17992083-17992265 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 145 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 178-463 |
Cow position: | chr18:36258018-36258311 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 198 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 52, 31 |
Conread position: | 178-474 |
Cow position: | chr18:16843003-16843295 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 28 |
Conread position: | 178-493 |
Cow position: | chr18:19539247-19539557 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 45 |
Conread position: | 178-505 |
Cow position: | chr18:51462741-51463063 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 81 |
Conread position: | 178-506 |
Cow position: | chr18:24040394-24040723 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 182 |
Conread position: | 178-637 |
Cow position: | chr18:51342024-51341562 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 181 |
Conread position: | 178-648 |
Cow position: | chr18:54044385-54044836 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 60 |
Conread position: | 178-654 |
Cow position: | chr18:16877806-16877345 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 75 |
Conread position: | 178-654 |
Cow position: | chr18:46877671-46878128 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 309 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 52, 136 |
Conread position: | 178-684 |
Cow position: | chr18:29048228-29048740 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 328 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 49, 84 |
Conread position: | 178-684 |
Cow position: | chr18:29237146-29236647 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 128 |
Conread position: | 178-704 |
Cow position: | chr18:53786175-53785649 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 28 |
Conread position: | 178-727 |
Cow position: | chr18:6868921-6869469 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 188 |
Conread position: | 178-728 |
Cow position: | chr18:16534316-16533768 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 181 |
Conread position: | 178-735 |
Cow position: | chr18:37599204-37599749 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 143 |
Conread position: | 178-802 |
Cow position: | chr18:33336199-33335582 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 7 |
Conread position: | 178-807 |
Cow position: | chr18:2019349-2019974 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 18 |
Conread position: | 178-808 |
Cow position: | chr18:23797985-23797355 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 181 |
Conread position: | 178-808 |
Cow position: | chr18:54171526-54172136 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 58 |
Conread position: | 178-810 |
Cow position: | chr18:47742356-47741720 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 185 |
Conread position: | 178-810 |
Cow position: | chr18:55088587-55089223 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 185 |
Conread position: | 178-812 |
Cow position: | chr18:1521483-1520830 (view UCSC Genome Browser custom track) |
Alignm length: | 660 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 197 |
Conread position: | 178-812 |
Cow position: | chr18:9186437-9187062 (view UCSC Genome Browser custom track) |
Alignm length: | 646 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 25 |
Conread position: | 178-812 |
Cow position: | chr18:23944037-23944671 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 185 |
Conread position: | 178-812 |
Cow position: | chr18:32294096-32293477 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 31 |
Conread position: | 178-812 |
Cow position: | chr18:33269163-33268544 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 179 |
Conread position: | 178-812 |
Cow position: | chr18:33359203-33358565 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 136 |
Conread position: | 178-812 |
Cow position: | chr18:35335817-35335185 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 181 |
Conread position: | 178-812 |
Cow position: | chr18:39748915-39748284 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 31 |
Conread position: | 178-812 |
Cow position: | chr18:43146588-43147225 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 184 |
Conread position: | 178-812 |
Cow position: | chr18:47719246-47719869 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 183 |
Conread position: | 178-812 |
Cow position: | chr18:48222216-48221579 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 77 |
Conread position: | 178-812 |
Cow position: | chr18:51310921-51310287 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 26 |
Conread position: | 178-812 |
Cow position: | chr18:51481177-51480540 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 185 |
Conread position: | 180-611 |
Cow position: | chr18:5980765-5980340 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 286 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 47, 74 |
Conread position: | 180-663 |
Cow position: | chr18:2886686-2887173 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 117 |
Conread position: | 183-750 |
Cow position: | chr18:51689957-51689390 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 176 |
Conread position: | 183-801 |
Cow position: | chr18:19352718-19352093 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 180 |
Conread position: | 183-809 |
Cow position: | chr18:22602820-22602190 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 178 |
Conread position: | 183-809 |
Cow position: | chr18:33953242-33953864 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 64 |
Conread position: | 183-810 |
Cow position: | chr18:16079050-16078405 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 180 |
Conread position: | 184-416 |
Cow position: | chr18:54003852-54003616 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 180 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 41, 54 |
Conread position: | 184-810 |
Cow position: | chr18:11274774-11275386 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 466 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 175 |
Conread position: | 185-812 |
Cow position: | chr18:51258314-51257683 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 176 |
Conread position: | 194-532 |
Cow position: | chr18:114711-114378 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 89 |
Conread position: | 196-496 |
Cow position: | chr18:45959036-45958737 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 133 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 31, 117 |
Conread position: | 210-484 |
Cow position: | chr18:32652522-32652251 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 21 |
Conread position: | 212-433 |
Cow position: | chr18:18089172-18089391 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 165 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 169, 18 |
Conread position: | 221-724 |
Cow position: | chr18:16393354-16393850 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 123 |
Conread position: | 232-812 |
Cow position: | chr18:54024078-54024655 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 129 |
Conread position: | 245-507 |
Cow position: | chr18:25350934-25350673 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 195 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 133, 112 |
Conread position: | 247-478 |
Cow position: | chr18:54269860-54269622 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 173 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 9, 111 |
Conread position: | 263-724 |
Cow position: | chr18:43201305-43200855 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 98 |
Conread position: | 315-809 |
Cow position: | chr18:29070443-29069968 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 309 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 77, 34 |
Conread position: | 318-502 |
Cow position: | chr18:8312457-8312276 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 64, 43 |
Conread position: | 318-809 |
Cow position: | chr18:29900501-29900031 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 316 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 61, 36 |
Conread position: | 328-811 |
Cow position: | chr18:45958870-45958404 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 245 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 195, 161 |
Conread position: | 329-728 |
Cow position: | chr18:48452717-48452317 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 259 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 121, 19 |
Conread position: | 342-641 |
Cow position: | chr18:35288710-35288402 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 220 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 40, 19 |
Conread position: | 350-812 |
Cow position: | chr18:17992401-17992861 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 9 |
Conread position: | 357-810 |
Cow position: | chr18:44621917-44621459 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 43 |
Conread position: | 357-812 |
Cow position: | chr18:16659847-16660304 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 48 |
Conread position: | 398-812 |
Cow position: | chr18:27987144-27986729 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 91 |
Conread position: | 440-635 |
Cow position: | chr18:29763530-29763335 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 137 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 79, 46 |
Conread position: | 451-810 |
Cow position: | chr18:51660481-51660126 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 38 |
Conread position: | 469-652 |
Cow position: | chr18:22869801-22869616 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 143 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 65, 20 |
Conread position: | 474-812 |
Cow position: | chr18:32652036-32651696 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 15 |
Conread position: | 496-789 |
Cow position: | chr18:51464457-51464750 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 207 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 38, 77 |
Conread position: | 496-806 |
Cow position: | chr18:19539855-19540164 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 65 |
Conread position: | 496-812 |
Cow position: | chr18:25350059-25349739 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 76 |
Conread position: | 500-809 |
Cow position: | chr18:37585648-37585960 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 75 |
Conread position: | 549-810 |
Cow position: | chr18:54002456-54002206 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 157 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 171, 79 |
Conread position: | 619-812 |
Cow position: | chr18:14130188-14129995 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 107, 169 |
Show alignments to all cow chromosomes.