Cow genome map


           Conread name:
           Tra1-TCH01C040031
        

               Conread position:
               167-811
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 196
               

               Conread position:
               171-330
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               171-760
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 192
               

               Conread position:
               172-456
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               172-612
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               172-812
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 188
               

               Conread position:
               175-395
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               204, 182
               

               Conread position:
               176-345
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               176-640
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 183
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 183
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 187
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 112
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 183
               

               Conread position:
               177-324
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               45, 137
               

               Conread position:
               177-483
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 182
               

               Conread position:
               177-811
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 186
               

               Conread position:
               177-812
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 186
               

               Conread position:
               177-812
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 186
               

               Conread position:
               178-301
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               178-307
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               178-355
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               44, 128
               

               Conread position:
               178-355
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               178-357
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               178-503
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 182
               

               Conread position:
               178-516
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 182
               

               Conread position:
               178-536
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 99
               

               Conread position:
               178-735
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               178-782
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 58
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 160
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 181
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 118
               

               Conread position:
               179-459
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 182
               

               Conread position:
               183-279
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               183-803
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 65
               

               Conread position:
               183-810
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 176
               

               Conread position:
               184-810
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 175
               

               Conread position:
               184-812
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 179
               

               Conread position:
               185-810
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 170
               

               Conread position:
               200-812
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               202-809
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 157
               

               Conread position:
               205-621
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 154
               

               Conread position:
               209-808
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               383
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               213-812
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               221-357
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-663
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 103
               

               Conread position:
               231-654
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 168
               

               Conread position:
               233-810
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 46
               

               Conread position:
               242-811
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 115
               

               Conread position:
               262-795
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               266-798
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 149
               

               Conread position:
               270-687
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 78
               

               Conread position:
               271-573
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 23
               

               Conread position:
               281-812
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               294-812
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 41
               

               Conread position:
               301-812
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 60
               

               Conread position:
               306-674
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               319-779
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               347-810
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               352-812
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               373-697
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               389-812
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 15
               

               Conread position:
               398-809
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 92
               

               Conread position:
               414-674
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               414-752
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               120, 20
               

               Conread position:
               448-808
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 25
               

               Conread position:
               496-810
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               38, 209
               

               Conread position:
               501-812
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               33, 112
               

               Conread position:
               516-812
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               532-779
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 111
               

               Conread position:
               559-782
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               639-812
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               87, 98
               
Show alignments to all cow chromosomes.