Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 172-651
Cow position:
Alignm length: 488
Alignm identity: 320
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 132

Conread position: 172-686
Cow position:
Alignm length: 533
Alignm identity: 343
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 5, 72

Conread position: 172-811
Cow position:
Alignm length: 648
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 91

Conread position: 173-811
Cow position:
Alignm length: 647
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 174-811
Cow position:
Alignm length: 643
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 82

Conread position: 176-809
Cow position:
Alignm length: 641
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 81

Conread position: 176-811
Cow position:
Alignm length: 643
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 33

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 187

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 177-691
Cow position:
Alignm length: 521
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 117

Conread position: 177-810
Cow position:
Alignm length: 636
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 14

Conread position: 178-313
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 178-322
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 178-359
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 44, 81

Conread position: 178-364
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 181

Conread position: 178-390
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 156

Conread position: 178-480
Cow position:
Alignm length: 307
Alignm identity: 209
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 41, 25

Conread position: 178-483
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 59

Conread position: 178-519
Cow position:
Alignm length: 345
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-532
Cow position:
Alignm length: 360
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 25

Conread position: 178-538
Cow position:
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 181

Conread position: 178-542
Cow position:
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 115

Conread position: 178-570
Cow position:
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 66

Conread position: 178-580
Cow position:
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-590
Cow position:
Alignm length: 419
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 183

Conread position: 178-625
Cow position:
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 187

Conread position: 178-641
Cow position:
Alignm length: 473
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 170

Conread position: 178-649
Cow position:
Alignm length: 479
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-655
Cow position:
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-674
Cow position:
Alignm length: 502
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 7

Conread position: 178-688
Cow position:
Alignm length: 514
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 156

Conread position: 178-727
Cow position:
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-786
Cow position:
Alignm length: 617
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 43

Conread position: 178-788
Cow position:
Alignm length: 618
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 178-791
Cow position:
Alignm length: 624
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 161

Conread position: 178-795
Cow position:
Alignm length: 624
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 178-795
Cow position:
Alignm length: 625
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 187

Conread position: 178-803
Cow position:
Alignm length: 642
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 114

Conread position: 178-804
Cow position:
Alignm length: 636
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 181

Conread position: 178-806
Cow position:
Alignm length: 638
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 182

Conread position: 178-809
Cow position:
Alignm length: 640
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 115

Conread position: 178-810
Cow position:
Alignm length: 664
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-810
Cow position:
Alignm length: 643
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 649
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 86

Conread position: 178-810
Cow position:
Alignm length: 644
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 180

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 179

Conread position: 178-812
Cow position:
Alignm length: 654
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 182

Conread position: 178-812
Cow position:
Alignm length: 650
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 124

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 639
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 179

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 52

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 50

Conread position: 178-812
Cow position:
Alignm length: 642
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 157

Conread position: 178-812
Cow position:
Alignm length: 653
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 106

Conread position: 180-553
Cow position:
Alignm length: 380
Alignm identity: 259
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 199, 44

Conread position: 183-317
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 183-532
Cow position:
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 113

Conread position: 183-810
Cow position:
Alignm length: 635
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 183-812
Cow position:
Alignm length: 643
Alignm identity: 405
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 6, 21

Conread position: 184-727
Cow position:
Alignm length: 546
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 36

Conread position: 184-810
Cow position:
Alignm length: 636
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 105

Conread position: 184-812
Cow position:
Alignm length: 637
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 175

Conread position: 185-811
Cow position:
Alignm length: 635
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 175

Conread position: 185-812
Cow position:
Alignm length: 659
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 191-479
Cow position:
Alignm length: 294
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 100

Conread position: 194-355
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 194-484
Cow position:
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 126

Conread position: 201-812
Cow position:
Alignm length: 617
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 133

Conread position: 202-380
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 20, 93

Conread position: 205-464
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 158

Conread position: 209-810
Cow position:
Alignm length: 605
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 50

Conread position: 212-393
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 147

Conread position: 212-609
Cow position:
Alignm length: 409
Alignm identity: 263
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 51, 7

Conread position: 221-812
Cow position:
Alignm length: 596
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 100

Conread position: 225-651
Cow position:
Alignm length: 437
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 19

Conread position: 234-733
Cow position:
Alignm length: 509
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 134

Conread position: 236-430
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 142, 111

Conread position: 245-810
Cow position:
Alignm length: 571
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 116

Conread position: 261-519
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 121, 41

Conread position: 269-703
Cow position:
Alignm length: 441
Alignm identity: 282
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 105, 88

Conread position: 276-720
Cow position:
Alignm length: 454
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 85

Conread position: 297-456
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 62

Conread position: 310-810
Cow position:
Alignm length: 511
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 51

Conread position: 320-812
Cow position:
Alignm length: 500
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 41

Conread position: 323-641
Cow position:
Alignm length: 326
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 37

Conread position: 342-523
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 380-809
Cow position:
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 19

Conread position: 382-812
Cow position:
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 14

Conread position: 387-728
Cow position:
Alignm length: 347
Alignm identity: 226
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 100

Conread position: 398-633
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 9

Conread position: 447-791
Cow position:
Alignm length: 353
Alignm identity: 215
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 15, 9

Conread position: 454-794
Cow position:
Alignm length: 350
Alignm identity: 226
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 35

Conread position: 460-812
Cow position:
Alignm length: 360
Alignm identity: 234
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 7

Conread position: 462-752
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 259, 27

Conread position: 493-810
Cow position:
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 78

Conread position: 496-812
Cow position:
Alignm length: 321
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 167

Conread position: 519-810
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 207, 9

Conread position: 521-812
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 36

Conread position: 529-812
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 64

Conread position: 537-811
Cow position:
Alignm length: 277
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 184, 91

Conread position: 582-812
Cow position:
Alignm length: 233
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 610-812
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 631-812
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 77

Show alignments to all cow chromosomes.