Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 171-810
Cow position:
Alignm length: 649
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 143

Conread position: 176-456
Cow position:
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-518
Cow position:
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 68

Conread position: 176-641
Cow position:
Alignm length: 489
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 33

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 654
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 176-812
Cow position:
Alignm length: 646
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 648
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 183

Conread position: 177-810
Cow position:
Alignm length: 641
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 178-288
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 178-330
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 51

Conread position: 178-336
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 178-362
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 178-376
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 148

Conread position: 178-613
Cow position:
Alignm length: 445
Alignm identity: 278
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 77

Conread position: 178-651
Cow position:
Alignm length: 483
Alignm identity: 304
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 201, 49

Conread position: 178-656
Cow position:
Alignm length: 485
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 88

Conread position: 178-674
Cow position:
Alignm length: 502
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-713
Cow position:
Alignm length: 543
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-766
Cow position:
Alignm length: 596
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-806
Cow position:
Alignm length: 644
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 90

Conread position: 178-809
Cow position:
Alignm length: 640
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 182

Conread position: 178-809
Cow position:
Alignm length: 640
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 641
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 68

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 643
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 182

Conread position: 178-810
Cow position:
Alignm length: 638
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 178-811
Cow position:
Alignm length: 643
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 103

Conread position: 178-812
Cow position:
Alignm length: 639
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 85

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 7

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 48

Conread position: 178-812
Cow position:
Alignm length: 657
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 87

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 142

Conread position: 179-812
Cow position:
Alignm length: 646
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 59

Conread position: 180-553
Cow position:
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 193

Conread position: 180-812
Cow position:
Alignm length: 649
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 140

Conread position: 181-590
Cow position:
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 58

Conread position: 183-492
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 46, 56

Conread position: 183-623
Cow position:
Alignm length: 448
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 183-812
Cow position:
Alignm length: 637
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 184-810
Cow position:
Alignm length: 633
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 84

Conread position: 184-812
Cow position:
Alignm length: 645
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 49

Conread position: 184-812
Cow position:
Alignm length: 635
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 179

Conread position: 185-786
Cow position:
Alignm length: 606
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 42

Conread position: 185-789
Cow position:
Alignm length: 613
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 68

Conread position: 185-810
Cow position:
Alignm length: 634
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 82

Conread position: 186-812
Cow position:
Alignm length: 633
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 69

Conread position: 188-809
Cow position:
Alignm length: 630
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 173

Conread position: 191-443
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 103

Conread position: 221-503
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 158, 132

Conread position: 221-656
Cow position:
Alignm length: 441
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 136

Conread position: 261-812
Cow position:
Alignm length: 559
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 100

Conread position: 267-810
Cow position:
Alignm length: 550
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 24

Conread position: 287-807
Cow position:
Alignm length: 530
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 289-812
Cow position:
Alignm length: 527
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 72

Conread position: 290-732
Cow position:
Alignm length: 465
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 292-812
Cow position:
Alignm length: 546
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 65

Conread position: 343-810
Cow position:
Alignm length: 472
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 18

Conread position: 343-812
Cow position:
Alignm length: 473
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 11

Conread position: 350-783
Cow position:
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 11

Conread position: 350-810
Cow position:
Alignm length: 464
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 9

Conread position: 378-623
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 156, 21

Conread position: 403-812
Cow position:
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 82

Conread position: 409-812
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 76

Conread position: 449-812
Cow position:
Alignm length: 368
Alignm identity: 258
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 87, 6

Conread position: 471-809
Cow position:
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 18

Conread position: 514-812
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 20, 42

Conread position: 584-812
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 96, 44

Conread position: 588-809
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 133, 155

Conread position: 588-812
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 599-810
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 182, 28

Conread position: 646-812
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 678-812
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.