Cow genome map


           Conread name:
           Tra1-TCH01C040031
        

               Conread position:
               176-418
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               46, 103
               

               Conread position:
               176-611
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 183
               

               Conread position:
               176-790
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 192
               

               Conread position:
               176-810
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 187
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 187
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 183
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 188
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 187
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 117
               

               Conread position:
               176-812
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 189
               

               Conread position:
               178-429
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 105
               

               Conread position:
               178-434
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 77
               

               Conread position:
               178-497
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-532
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-561
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 177
               

               Conread position:
               178-804
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               178-809
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 76
               

               Conread position:
               178-809
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 81
               

               Conread position:
               178-810
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 77
               

               Conread position:
               178-811
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               412
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               49, 76
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 183
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 113
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 106
               

               Conread position:
               178-812
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 179
               

               Conread position:
               183-302
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               183-307
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               183-734
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 41
               

               Conread position:
               183-806
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               183-812
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 143
               

               Conread position:
               184-809
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 149
               

               Conread position:
               196-574
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 62
               

               Conread position:
               197-812
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 31
               

               Conread position:
               205-790
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               389
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               24, 116
               

               Conread position:
               211-812
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 150
               

               Conread position:
               221-809
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               273-508
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               105, 80
               

               Conread position:
               302-757
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 59
               

               Conread position:
               328-812
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               398-662
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 91
               

               Conread position:
               407-812
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 73
               

               Conread position:
               433-812
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 5
               

               Conread position:
               459-812
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               460-809
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               552-812
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               174, 208
               

               Conread position:
               606-812
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               120, 21
               
Show alignments to all cow chromosomes.