Cow genome map
| Conread name: | Tra1-TCH01C040031 |
| Conread position: | 176-443 |
| Cow position: | chr26:6849127-6849394 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-692 |
| Cow position: | chr26:30589062-30589577 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 176-795 |
| Cow position: | chr26:5675469-5674855 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 163 |
| Conread position: | 176-812 |
| Cow position: | chr26:9563048-9563687 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 176-812 |
| Cow position: | chr26:17396621-17397260 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr26:19351204-19351842 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 178-470 |
| Cow position: | chr26:9113046-9112753 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-470 |
| Cow position: | chr26:12666410-12666123 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 178-523 |
| Cow position: | chr26:8919158-8918814 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-641 |
| Cow position: | chr26:12656580-12656138 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 59 |
| Conread position: | 178-803 |
| Cow position: | chr26:11253748-11254378 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-804 |
| Cow position: | chr26:2352052-2352672 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 178-809 |
| Cow position: | chr26:3030521-3031135 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 186 |
| Conread position: | 178-809 |
| Cow position: | chr26:4604880-4605506 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 140 |
| Conread position: | 178-810 |
| Cow position: | chr26:8870190-8869550 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 190 |
| Conread position: | 178-810 |
| Cow position: | chr26:12588257-12588888 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 184 |
| Conread position: | 178-810 |
| Cow position: | chr26:15144452-15145084 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-811 |
| Cow position: | chr26:8282755-8283369 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 178-812 |
| Cow position: | chr26:12574101-12574725 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 158 |
| Conread position: | 183-464 |
| Cow position: | chr26:9845275-9845555 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 164 |
| Conread position: | 183-495 |
| Cow position: | chr26:18852522-18852211 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 183-787 |
| Cow position: | chr26:2198929-2198330 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 183-810 |
| Cow position: | chr26:18855391-18854768 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 183-810 |
| Cow position: | chr26:30783046-30782442 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 184-612 |
| Cow position: | chr26:20263152-20262732 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 186-454 |
| Cow position: | chr26:9849626-9849894 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 186-454 |
| Cow position: | chr26:9853137-9853404 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 196-812 |
| Cow position: | chr26:3692084-3691472 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 25 |
| Conread position: | 200-472 |
| Cow position: | chr26:23603481-23603753 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 157 |
| Conread position: | 231-449 |
| Cow position: | chr26:4334398-4334181 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 150, 126 |
| Conread position: | 258-812 |
| Cow position: | chr26:16904998-16904458 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 291-812 |
| Cow position: | chr26:20255247-20254746 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 304-451 |
| Cow position: | chr26:4806362-4806507 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 319-729 |
| Cow position: | chr26:5551939-5551531 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 181, 72 |
| Conread position: | 365-765 |
| Cow position: | chr26:11536716-11537115 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 39 |
| Conread position: | 398-601 |
| Cow position: | chr26:21350463-21350259 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 136, 85 |
| Conread position: | 414-812 |
| Cow position: | chr26:3074594-3074205 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 46 |
| Conread position: | 419-626 |
| Cow position: | chr26:9845547-9845754 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 425-725 |
| Cow position: | chr26:12666029-12665732 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 430-812 |
| Cow position: | chr26:6850119-6850503 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 59 |
| Conread position: | 462-623 |
| Cow position: | chr26:12659666-12659829 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 27 |
| Conread position: | 463-812 |
| Cow position: | chr26:23604878-23605238 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 21 |
| Conread position: | 496-810 |
| Cow position: | chr26:9112457-9112139 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 514-722 |
| Cow position: | chr26:9850649-9850870 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 514-722 |
| Cow position: | chr26:9854115-9854336 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 532-663 |
| Cow position: | chr26:6602158-6602027 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 599-810 |
| Cow position: | chr26:24201504-24201295 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 620-809 |
| Cow position: | chr26:19998351-19998161 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 116 |
| Conread position: | 627-812 |
| Cow position: | chr26:9846277-9846464 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 632-812 |
| Cow position: | chr26:12655798-12655629 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.