Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 176-443
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-692
Cow position:
Alignm length: 528
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 61

Conread position: 176-795
Cow position:
Alignm length: 628
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 163

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 162

Conread position: 176-812
Cow position:
Alignm length: 646
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 642
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 178-470
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-470
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 18

Conread position: 178-523
Cow position:
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-641
Cow position:
Alignm length: 473
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 59

Conread position: 178-803
Cow position:
Alignm length: 635
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-804
Cow position:
Alignm length: 632
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 95

Conread position: 178-809
Cow position:
Alignm length: 640
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-809
Cow position:
Alignm length: 636
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 140

Conread position: 178-810
Cow position:
Alignm length: 645
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 190

Conread position: 178-810
Cow position:
Alignm length: 638
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 184

Conread position: 178-810
Cow position:
Alignm length: 641
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-811
Cow position:
Alignm length: 641
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 73

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 158

Conread position: 183-464
Cow position:
Alignm length: 285
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 164

Conread position: 183-495
Cow position:
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 110

Conread position: 183-787
Cow position:
Alignm length: 611
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 183-810
Cow position:
Alignm length: 634
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 110

Conread position: 183-810
Cow position:
Alignm length: 632
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 184-612
Cow position:
Alignm length: 437
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 186-454
Cow position:
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 102

Conread position: 186-454
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 102

Conread position: 196-812
Cow position:
Alignm length: 628
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 25

Conread position: 200-472
Cow position:
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 157

Conread position: 231-449
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 150, 126

Conread position: 258-812
Cow position:
Alignm length: 566
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 103

Conread position: 291-812
Cow position:
Alignm length: 528
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 64

Conread position: 304-451
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 16

Conread position: 319-729
Cow position:
Alignm length: 415
Alignm identity: 262
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 181, 72

Conread position: 365-765
Cow position:
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 39

Conread position: 398-601
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 136, 85

Conread position: 414-812
Cow position:
Alignm length: 403
Alignm identity: 257
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 46

Conread position: 419-626
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 115, 19

Conread position: 425-725
Cow position:
Alignm length: 305
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 110, 16

Conread position: 430-812
Cow position:
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 59

Conread position: 462-623
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 27

Conread position: 463-812
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 496-810
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 514-722
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 171

Conread position: 514-722
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 171

Conread position: 532-663
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 599-810
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 28

Conread position: 620-809
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 106, 116

Conread position: 627-812
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 632-812
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.