Cow genome map
| Conread name: | Tra1-TCH01C040031 |
| Conread position: | 167-732 |
| Cow position: | chr27:26227544-26226988 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 171-812 |
| Cow position: | chr27:5911115-5910475 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 191 |
| Conread position: | 175-549 |
| Cow position: | chr27:16432664-16432296 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 176-395 |
| Cow position: | chr27:8561788-8561572 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 181 |
| Conread position: | 176-809 |
| Cow position: | chr27:1209598-1208963 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 176-811 |
| Cow position: | chr27:893454-892824 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr27:9992956-9993583 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 189 |
| Conread position: | 176-812 |
| Cow position: | chr27:14460209-14460848 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr27:26325062-26324422 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr27:27663142-27662502 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 178-330 |
| Cow position: | chr27:28078692-28078539 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 105 |
| Conread position: | 178-548 |
| Cow position: | chr27:27752951-27753324 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-553 |
| Cow position: | chr27:22316828-22316451 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 155 |
| Conread position: | 178-810 |
| Cow position: | chr27:16034149-16034782 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-812 |
| Cow position: | chr27:15277828-15278457 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 53 |
| Conread position: | 178-812 |
| Cow position: | chr27:16439573-16438942 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 178-812 |
| Cow position: | chr27:25002290-25002925 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 182 |
| Conread position: | 178-812 |
| Cow position: | chr27:25804651-25805269 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 178-812 |
| Cow position: | chr27:26555760-26556367 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 178-812 |
| Cow position: | chr27:27051929-27051272 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 183-809 |
| Cow position: | chr27:15541569-15540939 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 180 |
| Conread position: | 189-806 |
| Cow position: | chr27:23335412-23334777 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 190-484 |
| Cow position: | chr27:15638124-15638417 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 192-505 |
| Cow position: | chr27:26034825-26035137 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 127, 108 |
| Conread position: | 196-810 |
| Cow position: | chr27:2364979-2364361 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 165 |
| Conread position: | 237-492 |
| Cow position: | chr27:27197194-27197438 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 145, 54 |
| Conread position: | 250-751 |
| Cow position: | chr27:25160864-25160364 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 129, 107 |
| Conread position: | 373-806 |
| Cow position: | chr27:25999018-25999434 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 377-812 |
| Cow position: | chr27:3996331-3996760 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 157, 22 |
| Conread position: | 514-727 |
| Cow position: | chr27:5996823-5997035 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 123 |
| Conread position: | 515-812 |
| Cow position: | chr27:13898100-13897803 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 521-812 |
| Cow position: | chr27:25117146-25116861 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 651-812 |
| Cow position: | chr27:16432242-16432079 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
Show alignments to all cow chromosomes.