Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 175-810
Cow position: chr28:7822550-7821919 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 184

Conread position: 175-812
Cow position: chr28:33252604-33251996 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 98

Conread position: 176-302
Cow position: chr28:26425960-26426088 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 176-398
Cow position: chr28:10462859-10463086 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 163

Conread position: 176-473
Cow position: chr28:29820025-29819726 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-484
Cow position: chr28:1167590-1167899 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 182

Conread position: 176-484
Cow position: chr28:5751414-5751724 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 188

Conread position: 176-484
Cow position: chr28:34594270-34593961 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 183

Conread position: 176-620
Cow position: chr28:7740772-7740340 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 52

Conread position: 176-641
Cow position: chr28:5114520-5114976 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-641
Cow position: chr28:12409934-12410386 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 122

Conread position: 176-667
Cow position: chr28:24667870-24667379 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 176-692
Cow position: chr28:15377701-15378219 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 109

Conread position: 176-791
Cow position: chr28:7002281-7001661 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 187

Conread position: 176-812
Cow position: chr28:1814576-1815215 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 173

Conread position: 176-812
Cow position: chr28:2083887-2083256 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 75

Conread position: 176-812
Cow position: chr28:3192500-3193123 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position: chr28:8378860-8378218 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position: chr28:10581694-10582333 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 184

Conread position: 176-812
Cow position: chr28:12150595-12149974 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 116

Conread position: 176-812
Cow position: chr28:13460261-13459626 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 187

Conread position: 176-812
Cow position: chr28:14705380-14706019 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 104

Conread position: 176-812
Cow position: chr28:17388773-17388133 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position: chr28:18520168-18520809 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 117

Conread position: 176-812
Cow position: chr28:32792089-32792727 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 66

Conread position: 177-812
Cow position: chr28:22260859-22261499 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 187

Conread position: 178-291
Cow position: chr28:24652827-24652942 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 178-328
Cow position: chr28:6538972-6539124 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 178-330
Cow position: chr28:5937765-5937616 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 13

Conread position: 178-355
Cow position: chr28:13490440-13490261 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 178-357
Cow position: chr28:10071269-10071093 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 115

Conread position: 178-357
Cow position: chr28:22233110-22233289 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 105

Conread position: 178-384
Cow position: chr28:485273-485481 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 44, 181

Conread position: 178-417
Cow position: chr28:17324055-17324301 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 71

Conread position: 178-430
Cow position: chr28:1931695-1931948 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-434
Cow position: chr28:2845885-2846140 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 156

Conread position: 178-594
Cow position: chr28:9136762-9137178 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 125

Conread position: 178-607
Cow position: chr28:7789995-7790440 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-626
Cow position: chr28:22065455-22065898 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 290
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 65

Conread position: 178-763
Cow position: chr28:4380555-4381108 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 181

Conread position: 178-769
Cow position: chr28:34649233-34648630 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 137

Conread position: 178-786
Cow position: chr28:9154996-9155606 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 47

Conread position: 178-793
Cow position: chr28:6780044-6780656 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-802
Cow position: chr28:24587724-24587098 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position: chr28:1387111-1387736 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 77

Conread position: 178-810
Cow position: chr28:1953419-1952796 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position: chr28:13440587-13441223 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position: chr28:14750836-14750202 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 144

Conread position: 178-811
Cow position: chr28:9954422-9953788 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position: chr28:782684-782050 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position: chr28:2592204-2591575 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position: chr28:5812978-5812360 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 43

Conread position: 178-812
Cow position: chr28:7901651-7901011 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 190

Conread position: 178-812
Cow position: chr28:8721160-8721792 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 180-812
Cow position: chr28:21359289-21358673 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 183

Conread position: 181-812
Cow position: chr28:17667226-17667860 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 183

Conread position: 183-330
Cow position: chr28:30805403-30805552 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 183-561
Cow position: chr28:2724608-2724987 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 13

Conread position: 183-812
Cow position: chr28:21326069-21325446 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 22

Conread position: 184-376
Cow position: chr28:15682395-15682213 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 184-443
Cow position: chr28:2989422-2989691 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 43, 187

Conread position: 184-692
Cow position: chr28:1505135-1504628 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 175

Conread position: 184-810
Cow position: chr28:10618831-10619442 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 176

Conread position: 185-429
Cow position: chr28:5797714-5797470 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 174

Conread position: 185-635
Cow position: chr28:12232719-12233148 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 302
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 44, 109

Conread position: 191-812
Cow position: chr28:5566130-5565513 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 150

Conread position: 200-378
Cow position: chr28:22828283-22828104 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 157

Conread position: 203-810
Cow position: chr28:15920200-15920805 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 161

Conread position: 224-707
Cow position: chr28:18101702-18102168 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 306
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 152, 133

Conread position: 225-634
Cow position: chr28:11026725-11027121 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 259
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 97

Conread position: 253-787
Cow position: chr28:24306454-24306979 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 333
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 77

Conread position: 304-809
Cow position: chr28:15951141-15950636 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 57

Conread position: 306-789
Cow position: chr28:26426118-26426597 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 55

Conread position: 309-786
Cow position: chr28:7817360-7816912 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 50

Conread position: 311-624
Cow position: chr28:6657153-6657467 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 73, 11

Conread position: 348-692
Cow position: chr28:24652398-24652064 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 11

Conread position: 364-566
Cow position: chr28:22233589-22233789 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 170, 11

Conread position: 413-812
Cow position: chr28:17330473-17330880 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 23

Conread position: 420-812
Cow position: chr28:15681934-15681545 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 69

Conread position: 431-812
Cow position: chr28:29819604-29819222 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 58

Conread position: 440-612
Cow position: chr28:15035470-15035643 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 49

Conread position: 448-810
Cow position: chr28:22828068-22827718 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 84, 12

Conread position: 462-694
Cow position: chr28:2989684-2989911 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 72, 27

Conread position: 474-810
Cow position: chr28:34593832-34593497 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 474-812
Cow position: chr28:1168174-1168512 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 475-692
Cow position: chr28:5751884-5752104 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 14

Conread position: 479-812
Cow position: chr28:5796803-5796478 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 55, 22

Conread position: 507-812
Cow position: chr28:18089046-18089350 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 34

Conread position: 535-715
Cow position: chr28:2846569-2846741 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 539-812
Cow position: chr28:13522653-13522379 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 0

Conread position: 596-812
Cow position: chr28:26007898-26007683 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 32

Conread position: 636-806
Cow position: chr28:5115251-5115422 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 683-812
Cow position: chr28:7740037-7739906 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.