Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 171-452
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 211, 154

Conread position: 171-471
Cow position:
Alignm length: 305
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 139, 58

Conread position: 171-812
Cow position:
Alignm length: 647
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 192

Conread position: 175-303
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 175-303
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 175-391
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 175-812
Cow position:
Alignm length: 643
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 72

Conread position: 176-459
Cow position:
Alignm length: 287
Alignm identity: 178
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 46, 183

Conread position: 176-722
Cow position:
Alignm length: 557
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 153

Conread position: 176-727
Cow position:
Alignm length: 557
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 104

Conread position: 176-811
Cow position:
Alignm length: 653
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 51

Conread position: 176-811
Cow position:
Alignm length: 643
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 187

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 33

Conread position: 176-812
Cow position:
Alignm length: 642
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 181

Conread position: 176-812
Cow position:
Alignm length: 642
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 52

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 176-812
Cow position:
Alignm length: 646
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 663
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 312

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 652
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 159

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 92

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 187

Conread position: 177-811
Cow position:
Alignm length: 643
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 178-289
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 178-330
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 178-344
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 80

Conread position: 178-351
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 178-357
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 44, 161

Conread position: 178-364
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 51, 122

Conread position: 178-450
Cow position:
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 115, 25

Conread position: 178-508
Cow position:
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 132

Conread position: 178-561
Cow position:
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 178-590
Cow position:
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 178-604
Cow position:
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 76

Conread position: 178-630
Cow position:
Alignm length: 458
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-728
Cow position:
Alignm length: 561
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 74

Conread position: 178-751
Cow position:
Alignm length: 586
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 30

Conread position: 178-793
Cow position:
Alignm length: 625
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 156

Conread position: 178-793
Cow position:
Alignm length: 619
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 159

Conread position: 178-802
Cow position:
Alignm length: 632
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-809
Cow position:
Alignm length: 640
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-809
Cow position:
Alignm length: 640
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 155

Conread position: 178-809
Cow position:
Alignm length: 640
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 637
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 183

Conread position: 178-810
Cow position:
Alignm length: 644
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 187

Conread position: 178-810
Cow position:
Alignm length: 643
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-810
Cow position:
Alignm length: 642
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 145

Conread position: 178-810
Cow position:
Alignm length: 641
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 180

Conread position: 178-810
Cow position:
Alignm length: 646
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 157

Conread position: 178-811
Cow position:
Alignm length: 643
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 76

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 182

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 102

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 58

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 182

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 34

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 178-812
Cow position:
Alignm length: 639
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 181

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 116

Conread position: 178-812
Cow position:
Alignm length: 646
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 179

Conread position: 179-287
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 179-468
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 101

Conread position: 179-760
Cow position:
Alignm length: 605
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 181

Conread position: 180-479
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 47

Conread position: 180-809
Cow position:
Alignm length: 641
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 179

Conread position: 180-812
Cow position:
Alignm length: 636
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 179

Conread position: 183-434
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 176

Conread position: 183-728
Cow position:
Alignm length: 553
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 142

Conread position: 183-728
Cow position:
Alignm length: 553
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 178

Conread position: 183-781
Cow position:
Alignm length: 606
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 183-809
Cow position:
Alignm length: 636
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 183-810
Cow position:
Alignm length: 632
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 43

Conread position: 183-812
Cow position:
Alignm length: 640
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 183-812
Cow position:
Alignm length: 644
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 54

Conread position: 183-812
Cow position:
Alignm length: 639
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 90

Conread position: 184-634
Cow position:
Alignm length: 459
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 176

Conread position: 184-810
Cow position:
Alignm length: 634
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 175

Conread position: 185-336
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 185-637
Cow position:
Alignm length: 457
Alignm identity: 295
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 121

Conread position: 185-795
Cow position:
Alignm length: 627
Alignm identity: 401
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 166

Conread position: 187-807
Cow position:
Alignm length: 629
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 109

Conread position: 194-401
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 60

Conread position: 196-508
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 58

Conread position: 198-812
Cow position:
Alignm length: 622
Alignm identity: 385
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 71

Conread position: 199-704
Cow position:
Alignm length: 518
Alignm identity: 332
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 52

Conread position: 199-811
Cow position:
Alignm length: 629
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 100

Conread position: 200-812
Cow position:
Alignm length: 621
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 163

Conread position: 201-812
Cow position:
Alignm length: 617
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 113

Conread position: 204-397
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 155

Conread position: 204-812
Cow position:
Alignm length: 617
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 43

Conread position: 205-812
Cow position:
Alignm length: 619
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 62

Conread position: 207-634
Cow position:
Alignm length: 443
Alignm identity: 290
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 47

Conread position: 213-479
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 146

Conread position: 216-586
Cow position:
Alignm length: 375
Alignm identity: 239
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 164, 88

Conread position: 240-570
Cow position:
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 117

Conread position: 245-544
Cow position:
Alignm length: 306
Alignm identity: 179
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 133, 112

Conread position: 251-728
Cow position:
Alignm length: 485
Alignm identity: 294
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 102

Conread position: 258-554
Cow position:
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 99

Conread position: 268-788
Cow position:
Alignm length: 528
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 91

Conread position: 270-718
Cow position:
Alignm length: 455
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 94

Conread position: 281-663
Cow position:
Alignm length: 388
Alignm identity: 266
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 101, 22

Conread position: 289-479
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 93, 65

Conread position: 289-811
Cow position:
Alignm length: 530
Alignm identity: 331
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 55

Conread position: 291-810
Cow position:
Alignm length: 525
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 68

Conread position: 292-484
Cow position:
Alignm length: 194
Alignm identity: 151
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 87, 67

Conread position: 294-470
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 29

Conread position: 317-812
Cow position:
Alignm length: 503
Alignm identity: 317
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 16

Conread position: 326-810
Cow position:
Alignm length: 491
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 35

Conread position: 342-731
Cow position:
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 342-812
Cow position:
Alignm length: 475
Alignm identity: 317
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 12

Conread position: 352-690
Cow position:
Alignm length: 345
Alignm identity: 220
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 9

Conread position: 358-812
Cow position:
Alignm length: 460
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 42

Conread position: 361-810
Cow position:
Alignm length: 455
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 39

Conread position: 407-737
Cow position:
Alignm length: 338
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 20

Conread position: 409-811
Cow position:
Alignm length: 409
Alignm identity: 266
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 9

Conread position: 416-812
Cow position:
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 73

Conread position: 426-727
Cow position:
Alignm length: 305
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 108, 23

Conread position: 455-722
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 79, 34

Conread position: 458-812
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 76, 31

Conread position: 460-779
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 73, 28

Conread position: 464-671
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 25

Conread position: 466-812
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 159

Conread position: 467-810
Cow position:
Alignm length: 347
Alignm identity: 220
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 19

Conread position: 478-812
Cow position:
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 479-810
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 495-812
Cow position:
Alignm length: 323
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 243

Conread position: 532-812
Cow position:
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 538-810
Cow position:
Alignm length: 274
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 183, 0

Conread position: 541-812
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 17

Conread position: 542-809
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 179, 201

Conread position: 547-812
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 177, 0

Conread position: 561-812
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 7, 0

Conread position: 564-714
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 149

Conread position: 573-806
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 589-810
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 132, 25

Conread position: 596-806
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 132, 29

Conread position: 646-812
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.