Cow genome map
| Conread name: | Tra1-TCH01C040031 |
| Conread position: | 171-452 |
| Cow position: | chr5:27001686-27001409 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 211, 154 |
| Conread position: | 171-471 |
| Cow position: | chr5:24108516-24108813 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 171-812 |
| Cow position: | chr5:64781939-64782582 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 192 |
| Conread position: | 175-303 |
| Cow position: | chr5:27059049-27059179 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 175-303 |
| Cow position: | chr5:27059952-27060082 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 175-391 |
| Cow position: | chr5:4385321-4385114 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 175-812 |
| Cow position: | chr5:3785860-3785246 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 176-459 |
| Cow position: | chr5:73489487-73489772 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-722 |
| Cow position: | chr5:49518732-49518189 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 176-727 |
| Cow position: | chr5:28007264-28006741 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 104 |
| Conread position: | 176-811 |
| Cow position: | chr5:14659029-14659653 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 51 |
| Conread position: | 176-811 |
| Cow position: | chr5:30579396-30578761 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 187 |
| Conread position: | 176-812 |
| Cow position: | chr5:415648-416284 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr5:2430058-2430697 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr5:2914522-2913885 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 33 |
| Conread position: | 176-812 |
| Cow position: | chr5:4069062-4068425 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 181 |
| Conread position: | 176-812 |
| Cow position: | chr5:7273902-7273301 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 176-812 |
| Cow position: | chr5:10918869-10918232 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 176-812 |
| Cow position: | chr5:24098723-24098082 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr5:34696677-34696019 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 312 |
| Conread position: | 176-812 |
| Cow position: | chr5:37732420-37731780 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr5:46738511-46739147 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr5:49119207-49119843 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr5:54792561-54793183 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 159 |
| Conread position: | 176-812 |
| Cow position: | chr5:55628060-55627439 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 176-812 |
| Cow position: | chr5:57482472-57483112 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 187 |
| Conread position: | 177-811 |
| Cow position: | chr5:48808642-48809278 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 182 |
| Conread position: | 178-289 |
| Cow position: | chr5:18666066-18665953 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 178-330 |
| Cow position: | chr5:23960243-23960397 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 178-344 |
| Cow position: | chr5:27682670-27682837 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 178-351 |
| Cow position: | chr5:10843347-10843522 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 178-357 |
| Cow position: | chr5:27570184-27570004 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 44, 161 |
| Conread position: | 178-364 |
| Cow position: | chr5:76123509-76123694 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 51, 122 |
| Conread position: | 178-450 |
| Cow position: | chr5:29435895-29436169 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 115, 25 |
| Conread position: | 178-508 |
| Cow position: | chr5:20971974-20972291 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 178-561 |
| Cow position: | chr5:52434037-52433663 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 178-590 |
| Cow position: | chr5:26068654-26069056 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 178-604 |
| Cow position: | chr5:25000574-25001004 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 178-630 |
| Cow position: | chr5:41962166-41962617 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-728 |
| Cow position: | chr5:14346307-14346853 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 178-751 |
| Cow position: | chr5:46659782-46659224 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 30 |
| Conread position: | 178-793 |
| Cow position: | chr5:34203007-34202401 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 156 |
| Conread position: | 178-793 |
| Cow position: | chr5:47831041-47831641 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 159 |
| Conread position: | 178-802 |
| Cow position: | chr5:4019126-4019754 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 183 |
| Conread position: | 178-809 |
| Cow position: | chr5:26079146-26079781 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-809 |
| Cow position: | chr5:31706646-31706015 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 155 |
| Conread position: | 178-809 |
| Cow position: | chr5:48468207-48468837 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr5:2531343-2530711 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-810 |
| Cow position: | chr5:10776192-10776811 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-810 |
| Cow position: | chr5:14380234-14379606 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 178-810 |
| Cow position: | chr5:27909200-27909831 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr5:32772554-32771918 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 183 |
| Conread position: | 178-810 |
| Cow position: | chr5:45182031-45182658 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr5:46644759-46644146 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 187 |
| Conread position: | 178-810 |
| Cow position: | chr5:46664075-46663442 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 183 |
| Conread position: | 178-810 |
| Cow position: | chr5:46776152-46775529 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 178-810 |
| Cow position: | chr5:58196074-58195440 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 180 |
| Conread position: | 178-810 |
| Cow position: | chr5:59060690-59060056 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 157 |
| Conread position: | 178-811 |
| Cow position: | chr5:51162970-51162352 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 178-812 |
| Cow position: | chr5:9686355-9686971 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 182 |
| Conread position: | 178-812 |
| Cow position: | chr5:26769876-26769248 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 102 |
| Conread position: | 178-812 |
| Cow position: | chr5:29009425-29008796 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 58 |
| Conread position: | 178-812 |
| Cow position: | chr5:32673668-32674293 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 182 |
| Conread position: | 178-812 |
| Cow position: | chr5:32945946-32945316 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-812 |
| Cow position: | chr5:39164728-39165363 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-812 |
| Cow position: | chr5:41529522-41530135 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 178-812 |
| Cow position: | chr5:41550854-41551488 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 178-812 |
| Cow position: | chr5:46630369-46630977 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 181 |
| Conread position: | 178-812 |
| Cow position: | chr5:49182341-49181721 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 116 |
| Conread position: | 178-812 |
| Cow position: | chr5:49593383-49594020 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 179 |
| Conread position: | 179-287 |
| Cow position: | chr5:40053528-40053420 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-468 |
| Cow position: | chr5:57977329-57977037 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 101 |
| Conread position: | 179-760 |
| Cow position: | chr5:27651911-27652499 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 181 |
| Conread position: | 180-479 |
| Cow position: | chr5:31202559-31202846 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 180-809 |
| Cow position: | chr5:45700336-45699718 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 179 |
| Conread position: | 180-812 |
| Cow position: | chr5:32733182-32733808 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 179 |
| Conread position: | 183-434 |
| Cow position: | chr5:27489314-27489063 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 176 |
| Conread position: | 183-728 |
| Cow position: | chr5:29042578-29042030 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 142 |
| Conread position: | 183-728 |
| Cow position: | chr5:44459550-44459001 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 178 |
| Conread position: | 183-781 |
| Cow position: | chr5:54932151-54932752 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 183-809 |
| Cow position: | chr5:24576982-24576351 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 183-810 |
| Cow position: | chr5:3964522-3963914 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 43 |
| Conread position: | 183-812 |
| Cow position: | chr5:24330341-24329732 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 183-812 |
| Cow position: | chr5:26089765-26090394 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 183-812 |
| Cow position: | chr5:59482320-59481689 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 184-634 |
| Cow position: | chr5:6588954-6589408 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 176 |
| Conread position: | 184-810 |
| Cow position: | chr5:28031543-28030930 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 175 |
| Conread position: | 185-336 |
| Cow position: | chr5:9043103-9042950 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 185-637 |
| Cow position: | chr5:49129285-49128851 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 295 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 185-795 |
| Cow position: | chr5:53626697-53627305 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 401 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 153, 166 |
| Conread position: | 187-807 |
| Cow position: | chr5:31101548-31102153 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 194-401 |
| Cow position: | chr5:12643886-12644091 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 196-508 |
| Cow position: | chr5:23755565-23755879 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 198-812 |
| Cow position: | chr5:26508488-26507893 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 385 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 199-704 |
| Cow position: | chr5:47073952-47073455 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 199-811 |
| Cow position: | chr5:61019798-61020402 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 200-812 |
| Cow position: | chr5:3504200-3504807 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 163 |
| Conread position: | 201-812 |
| Cow position: | chr5:61273138-61273727 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 204-397 |
| Cow position: | chr5:17773994-17774189 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 204-812 |
| Cow position: | chr5:6158152-6158758 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 205-812 |
| Cow position: | chr5:1341752-1342361 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 207-634 |
| Cow position: | chr5:51319203-51319624 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 47 |
| Conread position: | 213-479 |
| Cow position: | chr5:5786570-5786829 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 9, 146 |
| Conread position: | 216-586 |
| Cow position: | chr5:39872435-39872080 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 164, 88 |
| Conread position: | 240-570 |
| Cow position: | chr5:58819626-58819957 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 117 |
| Conread position: | 245-544 |
| Cow position: | chr5:18654048-18653745 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 133, 112 |
| Conread position: | 251-728 |
| Cow position: | chr5:26054757-26054288 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 294 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 258-554 |
| Cow position: | chr5:5317767-5318063 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 99 |
| Conread position: | 268-788 |
| Cow position: | chr5:4088785-4088264 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 91 |
| Conread position: | 270-718 |
| Cow position: | chr5:25206762-25207211 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 94 |
| Conread position: | 281-663 |
| Cow position: | chr5:57366057-57366432 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 289-479 |
| Cow position: | chr5:39247424-39247606 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 289-811 |
| Cow position: | chr5:16103819-16104328 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 331 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 291-810 |
| Cow position: | chr5:18665919-18665398 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 292-484 |
| Cow position: | chr5:52805322-52805132 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 87, 67 |
| Conread position: | 294-470 |
| Cow position: | chr5:27060294-27060465 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 317-812 |
| Cow position: | chr5:58060909-58061386 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 326-810 |
| Cow position: | chr5:53715176-53714693 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 342-731 |
| Cow position: | chr5:46005470-46005867 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 342-812 |
| Cow position: | chr5:27682864-27683308 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 317 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 352-690 |
| Cow position: | chr5:7811659-7811989 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 358-812 |
| Cow position: | chr5:23228147-23227695 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 361-810 |
| Cow position: | chr5:10843986-10844438 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 407-737 |
| Cow position: | chr5:27569996-27569666 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 409-811 |
| Cow position: | chr5:51771508-51771902 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 107, 9 |
| Conread position: | 416-812 |
| Cow position: | chr5:4385060-4384666 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 73 |
| Conread position: | 426-727 |
| Cow position: | chr5:27488841-27488545 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 455-722 |
| Cow position: | chr5:30087927-30088192 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 458-812 |
| Cow position: | chr5:12644095-12644440 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 460-779 |
| Cow position: | chr5:28570484-28570166 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 464-671 |
| Cow position: | chr5:23768078-23767875 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 466-812 |
| Cow position: | chr5:12681725-12682066 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 24, 159 |
| Conread position: | 467-810 |
| Cow position: | chr5:29123019-29123359 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 478-812 |
| Cow position: | chr5:23716177-23716510 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 479-810 |
| Cow position: | chr5:35299834-35299500 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 495-812 |
| Cow position: | chr5:59144537-59144216 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 243 |
| Conread position: | 532-812 |
| Cow position: | chr5:59282478-59282197 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 538-810 |
| Cow position: | chr5:18663957-18663684 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 541-812 |
| Cow position: | chr5:52805041-52804769 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 542-809 |
| Cow position: | chr5:37755433-37755701 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 179, 201 |
| Conread position: | 547-812 |
| Cow position: | chr5:12185361-12185095 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 561-812 |
| Cow position: | chr5:6519572-6519334 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 564-714 |
| Cow position: | chr5:57977038-57976885 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 149 |
| Conread position: | 573-806 |
| Cow position: | chr5:58747559-58747332 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 589-810 |
| Cow position: | chr5:23960451-23960671 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 132, 25 |
| Conread position: | 596-806 |
| Cow position: | chr5:10443555-10443760 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 132, 29 |
| Conread position: | 646-812 |
| Cow position: | chr5:23687868-23688036 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.