Cow genome map
| Conread name: | Tra1-TCH01C040031 |
| Conread position: | 171-812 |
| Cow position: | chr6:65881088-65880443 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 192 |
| Conread position: | 175-460 |
| Cow position: | chr6:47042982-47043273 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 175-578 |
| Cow position: | chr6:28105629-28106022 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 175-812 |
| Cow position: | chr6:65841801-65841166 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 184 |
| Conread position: | 176-294 |
| Cow position: | chr6:1822424-1822544 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 176-484 |
| Cow position: | chr6:64715445-64715138 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 155 |
| Conread position: | 176-733 |
| Cow position: | chr6:40554371-40554929 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 176-795 |
| Cow position: | chr6:36526262-36525636 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 190 |
| Conread position: | 176-812 |
| Cow position: | chr6:702166-701530 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 51 |
| Conread position: | 176-812 |
| Cow position: | chr6:3277734-3278373 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr6:3889262-3889910 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 184 |
| Conread position: | 176-812 |
| Cow position: | chr6:8201953-8201309 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 193 |
| Conread position: | 176-812 |
| Cow position: | chr6:8761089-8761724 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 176-812 |
| Cow position: | chr6:15280336-15280966 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr6:17046271-17045640 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 158 |
| Conread position: | 176-812 |
| Cow position: | chr6:20560896-20561532 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr6:24239281-24238624 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr6:27469463-27468835 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 176-812 |
| Cow position: | chr6:27529791-27530422 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 158 |
| Conread position: | 176-812 |
| Cow position: | chr6:29311707-29311072 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr6:30274963-30275604 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 176-812 |
| Cow position: | chr6:34892790-34893430 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 144 |
| Conread position: | 176-812 |
| Cow position: | chr6:35876502-35877137 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 181 |
| Conread position: | 176-812 |
| Cow position: | chr6:55544111-55544750 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 185 |
| Conread position: | 177-293 |
| Cow position: | chr6:58026972-58026855 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 177-809 |
| Cow position: | chr6:6566820-6566192 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 186 |
| Conread position: | 177-811 |
| Cow position: | chr6:913868-913210 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 189 |
| Conread position: | 178-321 |
| Cow position: | chr6:10641373-10641229 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 178-330 |
| Cow position: | chr6:65007900-65007748 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 178-369 |
| Cow position: | chr6:65899687-65899880 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 63 |
| Conread position: | 178-390 |
| Cow position: | chr6:40251877-40251663 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-434 |
| Cow position: | chr6:40315258-40315014 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 202, 31 |
| Conread position: | 178-458 |
| Cow position: | chr6:51190713-51190436 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 130, 109 |
| Conread position: | 178-479 |
| Cow position: | chr6:39908741-39908441 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-485 |
| Cow position: | chr6:3149218-3148911 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-516 |
| Cow position: | chr6:32074521-32074859 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 178-561 |
| Cow position: | chr6:52693237-52692865 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 44, 113 |
| Conread position: | 178-584 |
| Cow position: | chr6:1411726-1412130 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-589 |
| Cow position: | chr6:43793540-43793957 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 201 |
| Conread position: | 178-594 |
| Cow position: | chr6:11403258-11402848 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 178-605 |
| Cow position: | chr6:32330580-32330993 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 49 |
| Conread position: | 178-634 |
| Cow position: | chr6:16052094-16051642 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-641 |
| Cow position: | chr6:33460077-33459612 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 181 |
| Conread position: | 178-652 |
| Cow position: | chr6:37642595-37642139 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 34 |
| Conread position: | 178-675 |
| Cow position: | chr6:13847246-13846749 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 178-682 |
| Cow position: | chr6:13317284-13317776 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 31 |
| Conread position: | 178-722 |
| Cow position: | chr6:41553224-41552698 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 178-734 |
| Cow position: | chr6:37116349-37115796 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 104 |
| Conread position: | 178-737 |
| Cow position: | chr6:34203718-34203169 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 362 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 178-791 |
| Cow position: | chr6:44150342-44150958 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-795 |
| Cow position: | chr6:331255-331879 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 109 |
| Conread position: | 178-795 |
| Cow position: | chr6:44029253-44028644 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 178-795 |
| Cow position: | chr6:65821912-65822539 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-803 |
| Cow position: | chr6:34127567-34126937 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 177 |
| Conread position: | 178-809 |
| Cow position: | chr6:17598065-17598702 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-809 |
| Cow position: | chr6:27169795-27169156 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 189 |
| Conread position: | 178-810 |
| Cow position: | chr6:1405024-1405653 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-810 |
| Cow position: | chr6:2374914-2374290 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr6:2554920-2554286 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 185 |
| Conread position: | 178-810 |
| Cow position: | chr6:7141273-7141887 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 178-810 |
| Cow position: | chr6:13104272-13103638 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr6:13944123-13943492 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 182 |
| Conread position: | 178-810 |
| Cow position: | chr6:28063550-28062927 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 142 |
| Conread position: | 178-810 |
| Cow position: | chr6:43617929-43617294 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 144 |
| Conread position: | 178-810 |
| Cow position: | chr6:58408698-58409329 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr6:65928150-65927524 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 179 |
| Conread position: | 178-810 |
| Cow position: | chr6:68027006-68026360 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-811 |
| Cow position: | chr6:3488185-3488814 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 178-811 |
| Cow position: | chr6:30479313-30478677 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 226 |
| Conread position: | 178-812 |
| Cow position: | chr6:7179480-7180088 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 171 |
| Conread position: | 178-812 |
| Cow position: | chr6:15140966-15141598 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 183 |
| Conread position: | 178-812 |
| Cow position: | chr6:38232491-38231856 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 166 |
| Conread position: | 178-812 |
| Cow position: | chr6:59919071-59919697 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 138 |
| Conread position: | 178-812 |
| Cow position: | chr6:66232009-66231392 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 189 |
| Conread position: | 180-657 |
| Cow position: | chr6:1100375-1100853 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 183 |
| Conread position: | 181-716 |
| Cow position: | chr6:59740847-59741374 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 181-812 |
| Cow position: | chr6:11277486-11278116 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 182-812 |
| Cow position: | chr6:33389051-33388396 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 190 |
| Conread position: | 183-290 |
| Cow position: | chr6:10499515-10499624 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 183-649 |
| Cow position: | chr6:13277009-13276543 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 176 |
| Conread position: | 183-810 |
| Cow position: | chr6:28491305-28491935 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 183-812 |
| Cow position: | chr6:19454124-19453510 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 183-812 |
| Cow position: | chr6:26670649-26671281 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 181 |
| Conread position: | 183-812 |
| Cow position: | chr6:35420398-35420983 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 184-434 |
| Cow position: | chr6:6476281-6476525 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 45, 108 |
| Conread position: | 184-536 |
| Cow position: | chr6:25214466-25214115 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 175 |
| Conread position: | 184-810 |
| Cow position: | chr6:10558452-10559059 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 175 |
| Conread position: | 185-339 |
| Cow position: | chr6:43608151-43608307 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 185-510 |
| Cow position: | chr6:7866544-7866869 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 174 |
| Conread position: | 191-812 |
| Cow position: | chr6:5951045-5951659 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 169 |
| Conread position: | 191-812 |
| Cow position: | chr6:28275183-28274565 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 168 |
| Conread position: | 196-496 |
| Cow position: | chr6:33900426-33900727 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 197-298 |
| Cow position: | chr6:9738895-9738792 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 200-651 |
| Cow position: | chr6:10630644-10630205 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 204-812 |
| Cow position: | chr6:28474890-28474286 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 392 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 212-625 |
| Cow position: | chr6:48368555-48368158 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 220-812 |
| Cow position: | chr6:21971856-21971254 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 137 |
| Conread position: | 221-479 |
| Cow position: | chr6:31568636-31568885 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 24 |
| Conread position: | 223-784 |
| Cow position: | chr6:35433696-35433148 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 366 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 156, 27 |
| Conread position: | 224-654 |
| Cow position: | chr6:62397334-62396904 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 145 |
| Conread position: | 226-731 |
| Cow position: | chr6:16672544-16672049 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 65 |
| Conread position: | 230-811 |
| Cow position: | chr6:2954806-2955373 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 362 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 11, 103 |
| Conread position: | 232-812 |
| Cow position: | chr6:42927540-42926957 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 88 |
| Conread position: | 234-810 |
| Cow position: | chr6:57869847-57870425 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 127 |
| Conread position: | 258-484 |
| Cow position: | chr6:63197944-63198167 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 121, 103 |
| Conread position: | 261-443 |
| Cow position: | chr6:12092763-12092946 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 117, 96 |
| Conread position: | 266-666 |
| Cow position: | chr6:49520256-49520667 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 112, 91 |
| Conread position: | 308-810 |
| Cow position: | chr6:42722845-42723341 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 311-811 |
| Cow position: | chr6:57009787-57010270 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 20 |
| Conread position: | 311-812 |
| Cow position: | chr6:52116331-52115839 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 323 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 315-789 |
| Cow position: | chr6:44524685-44525151 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 50 |
| Conread position: | 318-812 |
| Cow position: | chr6:68362250-68362738 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 335-812 |
| Cow position: | chr6:11353796-11353313 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 341-713 |
| Cow position: | chr6:2886257-2885899 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 20 |
| Conread position: | 341-718 |
| Cow position: | chr6:10641175-10640801 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 342-812 |
| Cow position: | chr6:50497410-50497873 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 368-600 |
| Cow position: | chr6:8020098-8019869 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 395-812 |
| Cow position: | chr6:65899926-65900332 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 14 |
| Conread position: | 404-812 |
| Cow position: | chr6:1823264-1823669 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 85 |
| Conread position: | 423-810 |
| Cow position: | chr6:40275227-40274838 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 74 |
| Conread position: | 427-806 |
| Cow position: | chr6:42359716-42360086 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 107, 48 |
| Conread position: | 432-810 |
| Cow position: | chr6:65909383-65909012 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 437-794 |
| Cow position: | chr6:10054567-10054206 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 439-812 |
| Cow position: | chr6:39437593-39437220 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 50 |
| Conread position: | 445-812 |
| Cow position: | chr6:13978466-13978099 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 448-810 |
| Cow position: | chr6:40314845-40314490 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 449-811 |
| Cow position: | chr6:47043489-47043852 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 458-812 |
| Cow position: | chr6:21686821-21686472 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 461-728 |
| Cow position: | chr6:42564874-42564606 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 461-805 |
| Cow position: | chr6:6476524-6476869 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 467-724 |
| Cow position: | chr6:52804332-52804082 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 469-809 |
| Cow position: | chr6:45672187-45671849 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 477-810 |
| Cow position: | chr6:39908064-39907735 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 487-803 |
| Cow position: | chr6:65007741-65007428 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 131 |
| Conread position: | 492-812 |
| Cow position: | chr6:63198243-63198560 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 139 |
| Conread position: | 496-812 |
| Cow position: | chr6:64713438-64713126 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 496-812 |
| Cow position: | chr6:64715012-64714693 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 297 |
| Conread position: | 501-812 |
| Cow position: | chr6:12092971-12093276 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 129 |
| Conread position: | 533-674 |
| Cow position: | chr6:7867012-7866871 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 588-803 |
| Cow position: | chr6:43794907-43795123 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 592-809 |
| Cow position: | chr6:41757188-41757406 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 129, 151 |
| Conread position: | 593-809 |
| Cow position: | chr6:6935328-6935545 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 128, 150 |
| Conread position: | 601-812 |
| Cow position: | chr6:51730-51940 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 125, 5 |
| Conread position: | 615-812 |
| Cow position: | chr6:33459361-33459157 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 644-812 |
| Cow position: | chr6:52736147-52735981 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 648-809 |
| Cow position: | chr6:21836358-21836522 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 78, 104 |
Show alignments to all cow chromosomes.