Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 171-812
Cow position: chr6:65881088-65880443 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 192

Conread position: 175-460
Cow position: chr6:47042982-47043273 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 189

Conread position: 175-578
Cow position: chr6:28105629-28106022 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 279
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 73

Conread position: 175-812
Cow position: chr6:65841801-65841166 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 184

Conread position: 176-294
Cow position: chr6:1822424-1822544 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 176-484
Cow position: chr6:64715445-64715138 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 155

Conread position: 176-733
Cow position: chr6:40554371-40554929 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 70

Conread position: 176-795
Cow position: chr6:36526262-36525636 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 190

Conread position: 176-812
Cow position: chr6:702166-701530 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 51

Conread position: 176-812
Cow position: chr6:3277734-3278373 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position: chr6:3889262-3889910 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 184

Conread position: 176-812
Cow position: chr6:8201953-8201309 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 193

Conread position: 176-812
Cow position: chr6:8761089-8761724 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 176-812
Cow position: chr6:15280336-15280966 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position: chr6:17046271-17045640 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 158

Conread position: 176-812
Cow position: chr6:20560896-20561532 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position: chr6:24239281-24238624 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position: chr6:27469463-27468835 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 176-812
Cow position: chr6:27529791-27530422 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 158

Conread position: 176-812
Cow position: chr6:29311707-29311072 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position: chr6:30274963-30275604 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 176-812
Cow position: chr6:34892790-34893430 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 144

Conread position: 176-812
Cow position: chr6:35876502-35877137 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 181

Conread position: 176-812
Cow position: chr6:55544111-55544750 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 185

Conread position: 177-293
Cow position: chr6:58026972-58026855 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 104

Conread position: 177-809
Cow position: chr6:6566820-6566192 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 177-811
Cow position: chr6:913868-913210 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 189

Conread position: 178-321
Cow position: chr6:10641373-10641229 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 51, 85

Conread position: 178-330
Cow position: chr6:65007900-65007748 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 106

Conread position: 178-369
Cow position: chr6:65899687-65899880 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 63

Conread position: 178-390
Cow position: chr6:40251877-40251663 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 181

Conread position: 178-434
Cow position: chr6:40315258-40315014 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 202, 31

Conread position: 178-458
Cow position: chr6:51190713-51190436 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 181
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 130, 109

Conread position: 178-479
Cow position: chr6:39908741-39908441 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-485
Cow position: chr6:3149218-3148911 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-516
Cow position: chr6:32074521-32074859 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 21

Conread position: 178-561
Cow position: chr6:52693237-52692865 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 44, 113

Conread position: 178-584
Cow position: chr6:1411726-1412130 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-589
Cow position: chr6:43793540-43793957 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 201

Conread position: 178-594
Cow position: chr6:11403258-11402848 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 282
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 16

Conread position: 178-605
Cow position: chr6:32330580-32330993 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 49

Conread position: 178-634
Cow position: chr6:16052094-16051642 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-641
Cow position: chr6:33460077-33459612 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 181

Conread position: 178-652
Cow position: chr6:37642595-37642139 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 34

Conread position: 178-675
Cow position: chr6:13847246-13846749 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 85

Conread position: 178-682
Cow position: chr6:13317284-13317776 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 31

Conread position: 178-722
Cow position: chr6:41553224-41552698 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 35

Conread position: 178-734
Cow position: chr6:37116349-37115796 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 104

Conread position: 178-737
Cow position: chr6:34203718-34203169 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 362
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 44, 104

Conread position: 178-791
Cow position: chr6:44150342-44150958 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-795
Cow position: chr6:331255-331879 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 109

Conread position: 178-795
Cow position: chr6:44029253-44028644 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 26

Conread position: 178-795
Cow position: chr6:65821912-65822539 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-803
Cow position: chr6:34127567-34126937 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 177

Conread position: 178-809
Cow position: chr6:17598065-17598702 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-809
Cow position: chr6:27169795-27169156 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 189

Conread position: 178-810
Cow position: chr6:1405024-1405653 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position: chr6:2374914-2374290 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position: chr6:2554920-2554286 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 185

Conread position: 178-810
Cow position: chr6:7141273-7141887 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 178-810
Cow position: chr6:13104272-13103638 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position: chr6:13944123-13943492 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 182

Conread position: 178-810
Cow position: chr6:28063550-28062927 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 142

Conread position: 178-810
Cow position: chr6:43617929-43617294 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 144

Conread position: 178-810
Cow position: chr6:58408698-58409329 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position: chr6:65928150-65927524 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 179

Conread position: 178-810
Cow position: chr6:68027006-68026360 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-811
Cow position: chr6:3488185-3488814 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 79

Conread position: 178-811
Cow position: chr6:30479313-30478677 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 226

Conread position: 178-812
Cow position: chr6:7179480-7180088 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 171

Conread position: 178-812
Cow position: chr6:15140966-15141598 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-812
Cow position: chr6:38232491-38231856 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 166

Conread position: 178-812
Cow position: chr6:59919071-59919697 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 178-812
Cow position: chr6:66232009-66231392 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 189

Conread position: 180-657
Cow position: chr6:1100375-1100853 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 183

Conread position: 181-716
Cow position: chr6:59740847-59741374 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 71

Conread position: 181-812
Cow position: chr6:11277486-11278116 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 12

Conread position: 182-812
Cow position: chr6:33389051-33388396 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 190

Conread position: 183-290
Cow position: chr6:10499515-10499624 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 183-649
Cow position: chr6:13277009-13276543 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 183-810
Cow position: chr6:28491305-28491935 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 183-812
Cow position: chr6:19454124-19453510 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 64

Conread position: 183-812
Cow position: chr6:26670649-26671281 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 181

Conread position: 183-812
Cow position: chr6:35420398-35420983 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 119

Conread position: 184-434
Cow position: chr6:6476281-6476525 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 108

Conread position: 184-536
Cow position: chr6:25214466-25214115 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 175

Conread position: 184-810
Cow position: chr6:10558452-10559059 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 175

Conread position: 185-339
Cow position: chr6:43608151-43608307 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 185-510
Cow position: chr6:7866544-7866869 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 174

Conread position: 191-812
Cow position: chr6:5951045-5951659 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 169

Conread position: 191-812
Cow position: chr6:28275183-28274565 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 168

Conread position: 196-496
Cow position: chr6:33900426-33900727 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 60

Conread position: 197-298
Cow position: chr6:9738895-9738792 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 200-651
Cow position: chr6:10630644-10630205 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 298
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 59, 19

Conread position: 204-812
Cow position: chr6:28474890-28474286 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 392
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 125

Conread position: 212-625
Cow position: chr6:48368555-48368158 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 16, 40

Conread position: 220-812
Cow position: chr6:21971856-21971254 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 137

Conread position: 221-479
Cow position: chr6:31568636-31568885 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 24

Conread position: 223-784
Cow position: chr6:35433696-35433148 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 366
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 156, 27

Conread position: 224-654
Cow position: chr6:62397334-62396904 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 285
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 145

Conread position: 226-731
Cow position: chr6:16672544-16672049 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 65

Conread position: 230-811
Cow position: chr6:2954806-2955373 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 362
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 103

Conread position: 232-812
Cow position: chr6:42927540-42926957 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 88

Conread position: 234-810
Cow position: chr6:57869847-57870425 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 127

Conread position: 258-484
Cow position: chr6:63197944-63198167 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 121, 103

Conread position: 261-443
Cow position: chr6:12092763-12092946 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 117, 96

Conread position: 266-666
Cow position: chr6:49520256-49520667 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 291
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 112, 91

Conread position: 308-810
Cow position: chr6:42722845-42723341 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 46

Conread position: 311-811
Cow position: chr6:57009787-57010270 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 318
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 20

Conread position: 311-812
Cow position: chr6:52116331-52115839 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 323
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 68, 43

Conread position: 315-789
Cow position: chr6:44524685-44525151 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 299
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 50

Conread position: 318-812
Cow position: chr6:68362250-68362738 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 41

Conread position: 335-812
Cow position: chr6:11353796-11353313 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 306
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 46, 26

Conread position: 341-713
Cow position: chr6:2886257-2885899 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 20

Conread position: 341-718
Cow position: chr6:10641175-10640801 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 20

Conread position: 342-812
Cow position: chr6:50497410-50497873 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 368-600
Cow position: chr6:8020098-8019869 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 30

Conread position: 395-812
Cow position: chr6:65899926-65900332 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 14

Conread position: 404-812
Cow position: chr6:1823264-1823669 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 85

Conread position: 423-810
Cow position: chr6:40275227-40274838 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 74

Conread position: 427-806
Cow position: chr6:42359716-42360086 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 244
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 107, 48

Conread position: 432-810
Cow position: chr6:65909383-65909012 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 57

Conread position: 437-794
Cow position: chr6:10054567-10054206 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 49

Conread position: 439-812
Cow position: chr6:39437593-39437220 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 50

Conread position: 445-812
Cow position: chr6:13978466-13978099 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 44

Conread position: 448-810
Cow position: chr6:40314845-40314490 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 84, 41

Conread position: 449-811
Cow position: chr6:47043489-47043852 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 458-812
Cow position: chr6:21686821-21686472 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 31

Conread position: 461-728
Cow position: chr6:42564874-42564606 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 28

Conread position: 461-805
Cow position: chr6:6476524-6476869 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 28

Conread position: 467-724
Cow position: chr6:52804332-52804082 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 20

Conread position: 469-809
Cow position: chr6:45672187-45671849 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 20

Conread position: 477-810
Cow position: chr6:39908064-39907735 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 12

Conread position: 487-803
Cow position: chr6:65007741-65007428 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 131

Conread position: 492-812
Cow position: chr6:63198243-63198560 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 139

Conread position: 496-812
Cow position: chr6:64713438-64713126 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 78

Conread position: 496-812
Cow position: chr6:64715012-64714693 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 297

Conread position: 501-812
Cow position: chr6:12092971-12093276 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 129

Conread position: 533-674
Cow position: chr6:7867012-7866871 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 588-803
Cow position: chr6:43794907-43795123 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 26

Conread position: 592-809
Cow position: chr6:41757188-41757406 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 151

Conread position: 593-809
Cow position: chr6:6935328-6935545 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 128, 150

Conread position: 601-812
Cow position: chr6:51730-51940 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 5

Conread position: 615-812
Cow position: chr6:33459361-33459157 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 35

Conread position: 644-812
Cow position: chr6:52736147-52735981 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 67

Conread position: 648-809
Cow position: chr6:21836358-21836522 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 78, 104

Show alignments to all cow chromosomes.