Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 172-532
Cow position:
Alignm length: 363
Alignm identity: 233
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 180

Conread position: 175-641
Cow position:
Alignm length: 473
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 82

Conread position: 176-720
Cow position:
Alignm length: 554
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 121

Conread position: 176-807
Cow position:
Alignm length: 640
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-809
Cow position:
Alignm length: 641
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-810
Cow position:
Alignm length: 659
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 176-810
Cow position:
Alignm length: 642
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 647
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 183

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 83

Conread position: 176-812
Cow position:
Alignm length: 642
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 45

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 33

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 181

Conread position: 176-812
Cow position:
Alignm length: 653
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 641
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 185

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 184

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 182

Conread position: 177-452
Cow position:
Alignm length: 279
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 197, 51

Conread position: 177-691
Cow position:
Alignm length: 539
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 204

Conread position: 177-732
Cow position:
Alignm length: 569
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 160

Conread position: 177-812
Cow position:
Alignm length: 643
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 96

Conread position: 177-812
Cow position:
Alignm length: 643
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 14

Conread position: 177-812
Cow position:
Alignm length: 648
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 181

Conread position: 178-294
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 178-297
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 113

Conread position: 178-330
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 178-380
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 44, 27

Conread position: 178-394
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 185

Conread position: 178-405
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 68

Conread position: 178-410
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 182

Conread position: 178-424
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 181

Conread position: 178-429
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 122

Conread position: 178-480
Cow position:
Alignm length: 311
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 131, 71

Conread position: 178-493
Cow position:
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 171

Conread position: 178-531
Cow position:
Alignm length: 358
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 157

Conread position: 178-539
Cow position:
Alignm length: 369
Alignm identity: 235
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 74

Conread position: 178-579
Cow position:
Alignm length: 409
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 182

Conread position: 178-609
Cow position:
Alignm length: 438
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 24

Conread position: 178-632
Cow position:
Alignm length: 462
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-640
Cow position:
Alignm length: 469
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 136

Conread position: 178-645
Cow position:
Alignm length: 473
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 159

Conread position: 178-656
Cow position:
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-687
Cow position:
Alignm length: 516
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-695
Cow position:
Alignm length: 524
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 169

Conread position: 178-724
Cow position:
Alignm length: 553
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 11

Conread position: 178-735
Cow position:
Alignm length: 572
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 43

Conread position: 178-803
Cow position:
Alignm length: 636
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 74

Conread position: 178-809
Cow position:
Alignm length: 639
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 180

Conread position: 178-809
Cow position:
Alignm length: 641
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-809
Cow position:
Alignm length: 642
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 175

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 60

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 223

Conread position: 178-810
Cow position:
Alignm length: 641
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 111

Conread position: 178-810
Cow position:
Alignm length: 637
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 58

Conread position: 178-810
Cow position:
Alignm length: 644
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 178-810
Cow position:
Alignm length: 643
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-811
Cow position:
Alignm length: 646
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 76

Conread position: 178-811
Cow position:
Alignm length: 642
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 88

Conread position: 178-812
Cow position:
Alignm length: 646
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 182

Conread position: 178-812
Cow position:
Alignm length: 664
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 180

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 85

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 402
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 170, 100

Conread position: 178-812
Cow position:
Alignm length: 646
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 63

Conread position: 178-812
Cow position:
Alignm length: 640
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 77

Conread position: 178-812
Cow position:
Alignm length: 646
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-812
Cow position:
Alignm length: 642
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 16

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 179-427
Cow position:
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 180

Conread position: 180-307
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 53

Conread position: 180-573
Cow position:
Alignm length: 399
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 20

Conread position: 180-812
Cow position:
Alignm length: 646
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 184

Conread position: 180-812
Cow position:
Alignm length: 643
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 41

Conread position: 183-400
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 176

Conread position: 183-728
Cow position:
Alignm length: 552
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 183-809
Cow position:
Alignm length: 635
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 178

Conread position: 183-810
Cow position:
Alignm length: 641
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 118

Conread position: 183-812
Cow position:
Alignm length: 638
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 183-812
Cow position:
Alignm length: 638
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 62

Conread position: 184-498
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 21

Conread position: 185-396
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 174

Conread position: 185-687
Cow position:
Alignm length: 509
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 174

Conread position: 185-812
Cow position:
Alignm length: 634
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 107

Conread position: 186-662
Cow position:
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 171

Conread position: 186-812
Cow position:
Alignm length: 633
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 177

Conread position: 191-532
Cow position:
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 129

Conread position: 201-812
Cow position:
Alignm length: 619
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 159

Conread position: 203-808
Cow position:
Alignm length: 620
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 15

Conread position: 218-655
Cow position:
Alignm length: 443
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 32

Conread position: 221-414
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 161, 52

Conread position: 221-806
Cow position:
Alignm length: 592
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 136

Conread position: 221-812
Cow position:
Alignm length: 607
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 139

Conread position: 221-812
Cow position:
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 16

Conread position: 225-697
Cow position:
Alignm length: 478
Alignm identity: 306
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 80

Conread position: 226-626
Cow position:
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 80

Conread position: 226-806
Cow position:
Alignm length: 591
Alignm identity: 363
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 93

Conread position: 226-811
Cow position:
Alignm length: 588
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 86

Conread position: 226-812
Cow position:
Alignm length: 589
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 24

Conread position: 228-810
Cow position:
Alignm length: 590
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 231-812
Cow position:
Alignm length: 588
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 14

Conread position: 247-724
Cow position:
Alignm length: 482
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 151

Conread position: 270-728
Cow position:
Alignm length: 465
Alignm identity: 298
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 109, 91

Conread position: 273-475
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 84

Conread position: 276-590
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 44

Conread position: 279-812
Cow position:
Alignm length: 538
Alignm identity: 339
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 253, 55

Conread position: 283-724
Cow position:
Alignm length: 459
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 78

Conread position: 310-809
Cow position:
Alignm length: 506
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 49

Conread position: 312-790
Cow position:
Alignm length: 489
Alignm identity: 301
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 49

Conread position: 318-808
Cow position:
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 9

Conread position: 321-764
Cow position:
Alignm length: 450
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 14

Conread position: 328-812
Cow position:
Alignm length: 491
Alignm identity: 321
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 56, 33

Conread position: 342-790
Cow position:
Alignm length: 458
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 344-793
Cow position:
Alignm length: 464
Alignm identity: 287
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 10

Conread position: 377-634
Cow position:
Alignm length: 261
Alignm identity: 194
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 157, 27

Conread position: 398-812
Cow position:
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 91

Conread position: 437-812
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 49

Conread position: 458-751
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 76, 31

Conread position: 462-654
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 169

Conread position: 464-812
Cow position:
Alignm length: 359
Alignm identity: 248
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 25

Conread position: 467-812
Cow position:
Alignm length: 352
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 20

Conread position: 489-812
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 501-812
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 140, 31

Conread position: 532-812
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 194, 59

Conread position: 552-804
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 103, 0

Conread position: 564-812
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 64

Conread position: 571-806
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 628-810
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 631-811
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 631-812
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 632-812
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 662-812
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 0

Show alignments to all cow chromosomes.