Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 170-726
Cow position:
Alignm length: 569
Alignm identity: 360
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 44, 29

Conread position: 172-442
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 41

Conread position: 176-307
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 176-434
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 183

Conread position: 176-450
Cow position:
Alignm length: 280
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 46, 183

Conread position: 176-506
Cow position:
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 176-637
Cow position:
Alignm length: 470
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 176-637
Cow position:
Alignm length: 466
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-687
Cow position:
Alignm length: 518
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 183

Conread position: 176-723
Cow position:
Alignm length: 555
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-752
Cow position:
Alignm length: 584
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 176-757
Cow position:
Alignm length: 590
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 158

Conread position: 176-788
Cow position:
Alignm length: 619
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-792
Cow position:
Alignm length: 624
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-810
Cow position:
Alignm length: 642
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-810
Cow position:
Alignm length: 642
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 26

Conread position: 176-812
Cow position:
Alignm length: 646
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 63

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 647
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 71

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 183

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 177-505
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 232

Conread position: 177-611
Cow position:
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 11

Conread position: 177-806
Cow position:
Alignm length: 637
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 177-810
Cow position:
Alignm length: 643
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 177-812
Cow position:
Alignm length: 644
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 187

Conread position: 177-812
Cow position:
Alignm length: 643
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 177-812
Cow position:
Alignm length: 643
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 178-302
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 178-314
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 178-322
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 73

Conread position: 178-326
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 178-332
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 178-345
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 77

Conread position: 178-372
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 111

Conread position: 178-449
Cow position:
Alignm length: 277
Alignm identity: 207
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 7

Conread position: 178-531
Cow position:
Alignm length: 357
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-539
Cow position:
Alignm length: 365
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-551
Cow position:
Alignm length: 380
Alignm identity: 255
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 81, 66

Conread position: 178-576
Cow position:
Alignm length: 403
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 181

Conread position: 178-598
Cow position:
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 191

Conread position: 178-608
Cow position:
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 51

Conread position: 178-612
Cow position:
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 166

Conread position: 178-682
Cow position:
Alignm length: 517
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 27

Conread position: 178-693
Cow position:
Alignm length: 520
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 178-776
Cow position:
Alignm length: 609
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 40

Conread position: 178-803
Cow position:
Alignm length: 633
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-803
Cow position:
Alignm length: 635
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-805
Cow position:
Alignm length: 638
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 187

Conread position: 178-809
Cow position:
Alignm length: 638
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-809
Cow position:
Alignm length: 641
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 649
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 648
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 638
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 646
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 642
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 184

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 639
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 128

Conread position: 178-810
Cow position:
Alignm length: 643
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 116

Conread position: 178-812
Cow position:
Alignm length: 660
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 183

Conread position: 178-812
Cow position:
Alignm length: 651
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 177

Conread position: 178-812
Cow position:
Alignm length: 663
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 185

Conread position: 178-812
Cow position:
Alignm length: 642
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 156

Conread position: 178-812
Cow position:
Alignm length: 650
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 178-812
Cow position:
Alignm length: 665
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 178-812
Cow position:
Alignm length: 645
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 185

Conread position: 178-812
Cow position:
Alignm length: 658
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 66

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 182

Conread position: 178-812
Cow position:
Alignm length: 648
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 50

Conread position: 179-421
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 15

Conread position: 179-811
Cow position:
Alignm length: 646
Alignm identity: 411
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 162

Conread position: 180-452
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 29

Conread position: 183-474
Cow position:
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 183-497
Cow position:
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 113

Conread position: 183-629
Cow position:
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 175

Conread position: 183-809
Cow position:
Alignm length: 633
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 110

Conread position: 183-809
Cow position:
Alignm length: 636
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 181

Conread position: 184-812
Cow position:
Alignm length: 638
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 185-373
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 37, 175

Conread position: 185-812
Cow position:
Alignm length: 637
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 178

Conread position: 186-483
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 40

Conread position: 188-812
Cow position:
Alignm length: 632
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 94

Conread position: 188-812
Cow position:
Alignm length: 638
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 15

Conread position: 191-812
Cow position:
Alignm length: 632
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 43

Conread position: 196-788
Cow position:
Alignm length: 601
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 198-607
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 140

Conread position: 200-812
Cow position:
Alignm length: 621
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 157

Conread position: 206-514
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 46

Conread position: 209-789
Cow position:
Alignm length: 589
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 150

Conread position: 210-789
Cow position:
Alignm length: 588
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 86

Conread position: 221-469
Cow position:
Alignm length: 252
Alignm identity: 166
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 24

Conread position: 221-654
Cow position:
Alignm length: 441
Alignm identity: 297
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 158, 21

Conread position: 221-793
Cow position:
Alignm length: 582
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 146

Conread position: 230-810
Cow position:
Alignm length: 586
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 76

Conread position: 230-812
Cow position:
Alignm length: 588
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 131

Conread position: 245-812
Cow position:
Alignm length: 573
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 90

Conread position: 256-812
Cow position:
Alignm length: 561
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 105

Conread position: 268-811
Cow position:
Alignm length: 549
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 93

Conread position: 269-790
Cow position:
Alignm length: 540
Alignm identity: 353
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 110, 88

Conread position: 342-782
Cow position:
Alignm length: 449
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 350-612
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 142

Conread position: 368-810
Cow position:
Alignm length: 447
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 166, 7

Conread position: 402-634
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 132, 32

Conread position: 411-629
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 123, 75

Conread position: 423-810
Cow position:
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 66

Conread position: 425-699
Cow position:
Alignm length: 285
Alignm identity: 188
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 205

Conread position: 426-812
Cow position:
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 63

Conread position: 427-812
Cow position:
Alignm length: 398
Alignm identity: 260
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 18

Conread position: 430-810
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 59

Conread position: 438-810
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 20

Conread position: 438-812
Cow position:
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 51

Conread position: 440-674
Cow position:
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 49

Conread position: 449-812
Cow position:
Alignm length: 368
Alignm identity: 252
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 85, 40

Conread position: 455-812
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 460-812
Cow position:
Alignm length: 356
Alignm identity: 243
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 26

Conread position: 467-812
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 22

Conread position: 493-812
Cow position:
Alignm length: 323
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 68

Conread position: 496-757
Cow position:
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 132

Conread position: 496-810
Cow position:
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 172

Conread position: 496-812
Cow position:
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 117

Conread position: 498-810
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 36, 220

Conread position: 502-795
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 71

Conread position: 512-812
Cow position:
Alignm length: 310
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 119

Conread position: 538-810
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 542-812
Cow position:
Alignm length: 273
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 91

Conread position: 575-812
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 133, 60

Conread position: 583-810
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 137, 0

Conread position: 597-812
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 624-812
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 640-812
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 98

Show alignments to all cow chromosomes.