Cow genome map
| Conread name: | Tra1-TCH01C040031 |
| Conread position: | 170-714 |
| Cow position: | chr9:64118969-64118432 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 52 |
| Conread position: | 171-649 |
| Cow position: | chr9:3542957-3542480 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 188 |
| Conread position: | 172-812 |
| Cow position: | chr9:27034850-27034215 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 173-790 |
| Cow position: | chr9:3025252-3024641 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 397 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 175-473 |
| Cow position: | chr9:32969113-32968815 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 175-812 |
| Cow position: | chr9:30672514-30671876 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 188 |
| Conread position: | 175-812 |
| Cow position: | chr9:31807679-31807046 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 183 |
| Conread position: | 176-322 |
| Cow position: | chr9:18509658-18509806 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 176-354 |
| Cow position: | chr9:22653711-22653531 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 176-469 |
| Cow position: | chr9:51182049-51182343 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-478 |
| Cow position: | chr9:59510936-59510634 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 176-695 |
| Cow position: | chr9:25023156-25023677 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-811 |
| Cow position: | chr9:2171203-2170565 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 176-811 |
| Cow position: | chr9:42309828-42309190 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 187 |
| Conread position: | 176-812 |
| Cow position: | chr9:1995769-1996410 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 9 |
| Conread position: | 176-812 |
| Cow position: | chr9:3548028-3548664 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 176-812 |
| Cow position: | chr9:4532636-4532000 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 176-812 |
| Cow position: | chr9:5004144-5003519 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 187 |
| Conread position: | 176-812 |
| Cow position: | chr9:6050903-6051531 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 188 |
| Conread position: | 176-812 |
| Cow position: | chr9:10321953-10321328 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 176-812 |
| Cow position: | chr9:16175912-16175274 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 163 |
| Conread position: | 176-812 |
| Cow position: | chr9:29628602-29629241 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 176-812 |
| Cow position: | chr9:37971065-37971701 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr9:59174015-59174651 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 176-812 |
| Cow position: | chr9:59455453-59456093 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 184 |
| Conread position: | 176-812 |
| Cow position: | chr9:59482527-59483163 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 184 |
| Conread position: | 176-812 |
| Cow position: | chr9:59536240-59535605 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 184 |
| Conread position: | 176-812 |
| Cow position: | chr9:60277877-60278516 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 144 |
| Conread position: | 177-321 |
| Cow position: | chr9:7002665-7002519 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 177-810 |
| Cow position: | chr9:3566708-3567345 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 186 |
| Conread position: | 177-812 |
| Cow position: | chr9:9013251-9012614 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 187 |
| Conread position: | 177-812 |
| Cow position: | chr9:47002333-47001715 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 184 |
| Conread position: | 178-330 |
| Cow position: | chr9:2487987-2488142 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 178-330 |
| Cow position: | chr9:8968814-8968960 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 178-336 |
| Cow position: | chr9:31064576-31064416 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 178-356 |
| Cow position: | chr9:44818002-44817822 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 178-372 |
| Cow position: | chr9:20309388-20309583 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 188 |
| Conread position: | 178-397 |
| Cow position: | chr9:64018316-64018537 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-404 |
| Cow position: | chr9:15684072-15683852 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 178-452 |
| Cow position: | chr9:1980122-1979846 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-493 |
| Cow position: | chr9:13477079-13477379 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 178-579 |
| Cow position: | chr9:3006102-3006506 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-579 |
| Cow position: | chr9:50789820-50789417 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 158 |
| Conread position: | 178-590 |
| Cow position: | chr9:34992536-34992112 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 183 |
| Conread position: | 178-609 |
| Cow position: | chr9:3586511-3586064 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 178-621 |
| Cow position: | chr9:30826825-30826379 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-623 |
| Cow position: | chr9:37063660-37064100 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 105 |
| Conread position: | 178-715 |
| Cow position: | chr9:39993060-39992524 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 179 |
| Conread position: | 178-782 |
| Cow position: | chr9:35658088-35657503 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 72 |
| Conread position: | 178-795 |
| Cow position: | chr9:5424041-5424649 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 182 |
| Conread position: | 178-807 |
| Cow position: | chr9:25484016-25483383 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 178-809 |
| Cow position: | chr9:16268515-16267870 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 178-810 |
| Cow position: | chr9:1076054-1076689 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 182 |
| Conread position: | 178-810 |
| Cow position: | chr9:2186109-2185464 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 59 |
| Conread position: | 178-810 |
| Cow position: | chr9:25755080-25755695 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 185 |
| Conread position: | 178-810 |
| Cow position: | chr9:28678116-28677483 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 170 |
| Conread position: | 178-810 |
| Cow position: | chr9:31194023-31194659 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 178-810 |
| Cow position: | chr9:34242454-34243090 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 134 |
| Conread position: | 178-812 |
| Cow position: | chr9:2500151-2500789 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 185 |
| Conread position: | 178-812 |
| Cow position: | chr9:6757708-6757077 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 31 |
| Conread position: | 178-812 |
| Cow position: | chr9:7061949-7062600 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 181 |
| Conread position: | 178-812 |
| Cow position: | chr9:10315510-10314887 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 178-812 |
| Cow position: | chr9:15072657-15072021 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 142 |
| Conread position: | 178-812 |
| Cow position: | chr9:28625898-28626522 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 180 |
| Conread position: | 178-812 |
| Cow position: | chr9:31020965-31020312 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 236 |
| Conread position: | 178-812 |
| Cow position: | chr9:37129402-37130035 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 178-812 |
| Cow position: | chr9:42569014-42568379 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 178-812 |
| Cow position: | chr9:45873492-45872860 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 185 |
| Conread position: | 178-812 |
| Cow position: | chr9:59443993-59443361 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 178-812 |
| Cow position: | chr9:64159261-64158614 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 425 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 180-410 |
| Cow position: | chr9:54361572-54361346 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 180-511 |
| Cow position: | chr9:18837152-18836820 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 33, 185 |
| Conread position: | 181-652 |
| Cow position: | chr9:6110857-6111307 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 183-357 |
| Cow position: | chr9:49177689-49177865 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 183-429 |
| Cow position: | chr9:40191538-40191785 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 176 |
| Conread position: | 183-691 |
| Cow position: | chr9:9054927-9055438 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 178 |
| Conread position: | 183-694 |
| Cow position: | chr9:3355854-3356347 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 176 |
| Conread position: | 183-737 |
| Cow position: | chr9:131051-131612 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 186 |
| Conread position: | 183-809 |
| Cow position: | chr9:163365-163981 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 176 |
| Conread position: | 183-809 |
| Cow position: | chr9:4984910-4984288 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 136 |
| Conread position: | 183-809 |
| Cow position: | chr9:36724640-36724012 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 139 |
| Conread position: | 183-810 |
| Cow position: | chr9:17064245-17064879 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 190 |
| Conread position: | 183-810 |
| Cow position: | chr9:27934227-27933602 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 184-809 |
| Cow position: | chr9:780667-781292 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 179 |
| Conread position: | 184-812 |
| Cow position: | chr9:3156160-3155550 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 112 |
| Conread position: | 185-812 |
| Cow position: | chr9:792377-792998 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 186-450 |
| Cow position: | chr9:43663081-43662830 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 184, 61 |
| Conread position: | 191-484 |
| Cow position: | chr9:6974259-6973964 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 173 |
| Conread position: | 191-728 |
| Cow position: | chr9:52570780-52570257 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 196-443 |
| Cow position: | chr9:3393863-3394107 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 198-812 |
| Cow position: | chr9:37162683-37163302 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 161 |
| Conread position: | 202-410 |
| Cow position: | chr9:18067100-18067309 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 20, 157 |
| Conread position: | 204-496 |
| Cow position: | chr9:4280573-4280282 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 209-654 |
| Cow position: | chr9:3726390-3725944 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 296 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 209-810 |
| Cow position: | chr9:222437-223030 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 212-519 |
| Cow position: | chr9:2001301-2001600 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 99, 150 |
| Conread position: | 212-812 |
| Cow position: | chr9:2052557-2051966 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 221-809 |
| Cow position: | chr9:1251877-1252458 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 118 |
| Conread position: | 221-812 |
| Cow position: | chr9:28021649-28021053 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 222-416 |
| Cow position: | chr9:2475384-2475193 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 227-402 |
| Cow position: | chr9:37095287-37095111 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 151, 130 |
| Conread position: | 228-810 |
| Cow position: | chr9:4672698-4672115 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 26 |
| Conread position: | 240-454 |
| Cow position: | chr9:34720052-34719837 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 64, 120 |
| Conread position: | 261-810 |
| Cow position: | chr9:46625741-46626291 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 103 |
| Conread position: | 266-812 |
| Cow position: | chr9:3867462-3867994 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 347 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 40, 34 |
| Conread position: | 274-812 |
| Cow position: | chr9:29028183-29028723 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 87 |
| Conread position: | 289-812 |
| Cow position: | chr9:2200137-2199617 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 322-809 |
| Cow position: | chr9:15984478-15984000 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 335-812 |
| Cow position: | chr9:831449-831919 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 348-812 |
| Cow position: | chr9:6830586-6831038 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 348-812 |
| Cow position: | chr9:7002524-7002060 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 364-765 |
| Cow position: | chr9:8968966-8969368 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 371-812 |
| Cow position: | chr9:20309789-20310205 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 407-812 |
| Cow position: | chr9:26712414-26712811 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 319, 60 |
| Conread position: | 408-812 |
| Cow position: | chr9:22651057-22650661 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 81 |
| Conread position: | 414-812 |
| Cow position: | chr9:34106808-34107213 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 416-724 |
| Cow position: | chr9:13220229-13219916 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 73 |
| Conread position: | 416-812 |
| Cow position: | chr9:54360506-54360113 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 70 |
| Conread position: | 438-810 |
| Cow position: | chr9:1979821-1979455 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 53 |
| Conread position: | 441-760 |
| Cow position: | chr9:2697052-2697377 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 449-812 |
| Cow position: | chr9:1293944-1294310 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 453-812 |
| Cow position: | chr9:59510479-59510107 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 227 |
| Conread position: | 454-812 |
| Cow position: | chr9:51182835-51183202 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 35 |
| Conread position: | 461-812 |
| Cow position: | chr9:417670-418025 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 466-812 |
| Cow position: | chr9:829705-830045 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 466-812 |
| Cow position: | chr9:32968596-32968246 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 476-794 |
| Cow position: | chr9:2065367-2065685 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 495-810 |
| Cow position: | chr9:2488145-2488455 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 88 |
| Conread position: | 503-810 |
| Cow position: | chr9:60651649-60651954 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 548-812 |
| Cow position: | chr9:18509953-18510218 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 583-810 |
| Cow position: | chr9:33834537-33834765 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 583-810 |
| Cow position: | chr9:50789302-50789079 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 592-810 |
| Cow position: | chr9:3006548-3006764 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 596-810 |
| Cow position: | chr9:12401967-12401754 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 125, 139 |
| Conread position: | 601-812 |
| Cow position: | chr9:3586020-3585809 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 125, 114 |
| Conread position: | 622-812 |
| Cow position: | chr9:651390-651587 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 86, 134 |
Show alignments to all cow chromosomes.