Cow genome map

Conread name: Tra1-TCH01C040031

Conread position: 170-714
Cow position:
Alignm length: 556
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 52

Conread position: 171-649
Cow position:
Alignm length: 485
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 188

Conread position: 172-812
Cow position:
Alignm length: 649
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 75

Conread position: 173-790
Cow position:
Alignm length: 634
Alignm identity: 397
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 26

Conread position: 175-473
Cow position:
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 72

Conread position: 175-812
Cow position:
Alignm length: 643
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 188

Conread position: 175-812
Cow position:
Alignm length: 644
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 183

Conread position: 176-322
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 176-354
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 176-469
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-478
Cow position:
Alignm length: 307
Alignm identity: 199
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 27

Conread position: 176-695
Cow position:
Alignm length: 527
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-811
Cow position:
Alignm length: 646
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 115

Conread position: 176-811
Cow position:
Alignm length: 643
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 187

Conread position: 176-812
Cow position:
Alignm length: 651
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 9

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 176-812
Cow position:
Alignm length: 648
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 176-812
Cow position:
Alignm length: 642
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 187

Conread position: 176-812
Cow position:
Alignm length: 643
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 188

Conread position: 176-812
Cow position:
Alignm length: 641
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 79

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 163

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 67

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 184

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 184

Conread position: 176-812
Cow position:
Alignm length: 645
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 184

Conread position: 176-812
Cow position:
Alignm length: 644
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 177-321
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 177-810
Cow position:
Alignm length: 641
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 186

Conread position: 177-812
Cow position:
Alignm length: 644
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 187

Conread position: 177-812
Cow position:
Alignm length: 643
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 178-330
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 178-330
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 178-336
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 178-356
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 178-372
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 188

Conread position: 178-397
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 44, 181

Conread position: 178-404
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 109

Conread position: 178-452
Cow position:
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-493
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 100

Conread position: 178-579
Cow position:
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-579
Cow position:
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 158

Conread position: 178-590
Cow position:
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 183

Conread position: 178-609
Cow position:
Alignm length: 451
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 77

Conread position: 178-621
Cow position:
Alignm length: 450
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-623
Cow position:
Alignm length: 453
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 105

Conread position: 178-715
Cow position:
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 179

Conread position: 178-782
Cow position:
Alignm length: 609
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 72

Conread position: 178-795
Cow position:
Alignm length: 631
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 182

Conread position: 178-807
Cow position:
Alignm length: 638
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 81

Conread position: 178-809
Cow position:
Alignm length: 650
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 178-810
Cow position:
Alignm length: 641
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 182

Conread position: 178-810
Cow position:
Alignm length: 654
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 59

Conread position: 178-810
Cow position:
Alignm length: 637
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 185

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 170

Conread position: 178-810
Cow position:
Alignm length: 640
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 178-810
Cow position:
Alignm length: 642
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 185

Conread position: 178-812
Cow position:
Alignm length: 644
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 31

Conread position: 178-812
Cow position:
Alignm length: 656
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 181

Conread position: 178-812
Cow position:
Alignm length: 647
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 70

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 142

Conread position: 178-812
Cow position:
Alignm length: 642
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 180

Conread position: 178-812
Cow position:
Alignm length: 656
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 236

Conread position: 178-812
Cow position:
Alignm length: 652
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 76

Conread position: 178-812
Cow position:
Alignm length: 643
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 7

Conread position: 178-812
Cow position:
Alignm length: 641
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 185

Conread position: 178-812
Cow position:
Alignm length: 646
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 81

Conread position: 178-812
Cow position:
Alignm length: 665
Alignm identity: 425
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 51, 84

Conread position: 180-410
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 14

Conread position: 180-511
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 33, 185

Conread position: 181-652
Cow position:
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 74

Conread position: 183-357
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 183-429
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 183-691
Cow position:
Alignm length: 515
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 178

Conread position: 183-694
Cow position:
Alignm length: 517
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 176

Conread position: 183-737
Cow position:
Alignm length: 569
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 183-809
Cow position:
Alignm length: 635
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 183-809
Cow position:
Alignm length: 637
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 136

Conread position: 183-809
Cow position:
Alignm length: 634
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 139

Conread position: 183-810
Cow position:
Alignm length: 648
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 190

Conread position: 183-810
Cow position:
Alignm length: 635
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 13

Conread position: 184-809
Cow position:
Alignm length: 633
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 179

Conread position: 184-812
Cow position:
Alignm length: 636
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 112

Conread position: 185-812
Cow position:
Alignm length: 636
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 112

Conread position: 186-450
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 184, 61

Conread position: 191-484
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 173

Conread position: 191-728
Cow position:
Alignm length: 546
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 196-443
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 59

Conread position: 198-812
Cow position:
Alignm length: 622
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 161

Conread position: 202-410
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 20, 157

Conread position: 204-496
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 48

Conread position: 209-654
Cow position:
Alignm length: 455
Alignm identity: 296
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 20, 93

Conread position: 209-810
Cow position:
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 75

Conread position: 212-519
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 150

Conread position: 212-812
Cow position:
Alignm length: 619
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 34

Conread position: 221-809
Cow position:
Alignm length: 595
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 118

Conread position: 221-812
Cow position:
Alignm length: 601
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 144

Conread position: 222-416
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 9, 16

Conread position: 227-402
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 151, 130

Conread position: 228-810
Cow position:
Alignm length: 588
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 26

Conread position: 240-454
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 64, 120

Conread position: 261-810
Cow position:
Alignm length: 555
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 103

Conread position: 266-812
Cow position:
Alignm length: 552
Alignm identity: 347
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 40, 34

Conread position: 274-812
Cow position:
Alignm length: 544
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 87

Conread position: 289-812
Cow position:
Alignm length: 529
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 74

Conread position: 322-809
Cow position:
Alignm length: 500
Alignm identity: 313
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 42

Conread position: 335-812
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 26

Conread position: 348-812
Cow position:
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 348-812
Cow position:
Alignm length: 470
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 364-765
Cow position:
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 371-812
Cow position:
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 407-812
Cow position:
Alignm length: 407
Alignm identity: 261
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 319, 60

Conread position: 408-812
Cow position:
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 81

Conread position: 414-812
Cow position:
Alignm length: 408
Alignm identity: 258
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 36

Conread position: 416-724
Cow position:
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 73

Conread position: 416-812
Cow position:
Alignm length: 399
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 70

Conread position: 438-810
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 53

Conread position: 441-760
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 87, 34

Conread position: 449-812
Cow position:
Alignm length: 372
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 42

Conread position: 453-812
Cow position:
Alignm length: 374
Alignm identity: 244
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 227

Conread position: 454-812
Cow position:
Alignm length: 372
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 35

Conread position: 461-812
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 466-812
Cow position:
Alignm length: 350
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 23

Conread position: 466-812
Cow position:
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 23

Conread position: 476-794
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 58, 13

Conread position: 495-810
Cow position:
Alignm length: 319
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 88

Conread position: 503-810
Cow position:
Alignm length: 308
Alignm identity: 184
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 548-812
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 178, 0

Conread position: 583-810
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 138, 0

Conread position: 583-810
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 592-810
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 596-810
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 139

Conread position: 601-812
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 125, 114

Conread position: 622-812
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 134

Show alignments to all cow chromosomes.