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Cow genome map

           
Conread name:
           
Tra1-TCH01C060056
        

               
Conread position:
               
117-411
               

               
Cow position:
               
chr23:20784995-20785283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
122, 100
               

               
Conread position:
               
247-477
               

               
Cow position:
               
chr23:37098568-37098790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
247-505
               

               
Cow position:
               
chr23:10720778-10720521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
262-443
               

               
Cow position:
               
chr23:2536318-2536502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
450-655
               

               
Cow position:
               
chr23:22530188-22530391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
463-660
               

               
Cow position:
               
chr23:11225090-11224898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
174, 34
               

               
Conread position:
               
463-661
               

               
Cow position:
               
chr23:809745-809546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
465-605
               

               
Cow position:
               
chr23:1739693-1739553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
465-656
               

               
Cow position:
               
chr23:25884200-25884013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
468-658
               

               
Cow position:
               
chr23:34264519-34264707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
470-656
               

               
Cow position:
               
chr23:5603519-5603699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
168, 27
               

               
Conread position:
               
470-656
               

               
Cow position:
               
chr23:12363391-12363571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
168, 33
               

               
Conread position:
               
470-658
               

               
Cow position:
               
chr23:35718543-35718356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
168, 118
               

               
Conread position:
               
472-625
               

               
Cow position:
               
chr23:7155475-7155621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
472-660
               

               
Cow position:
               
chr23:4338115-4338304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
472-662
               

               
Cow position:
               
chr23:13073619-13073799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
473-642
               

               
Cow position:
               
chr23:4465736-4465906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
473-656
               

               
Cow position:
               
chr23:12091134-12091314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
473-657
               

               
Cow position:
               
chr23:5311566-5311386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
473-658
               

               
Cow position:
               
chr23:9226501-9226326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
165, 84
               

               
Conread position:
               
474-657
               

               
Cow position:
               
chr23:27413865-27414046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
164, 23
               

               
Conread position:
               
474-658
               

               
Cow position:
               
chr23:307685-307500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
475-609
               

               
Cow position:
               
chr23:19822242-19822374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
475-638
               

               
Cow position:
               
chr23:34875789-34875626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
475-643
               

               
Cow position:
               
chr23:28872928-28873090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
475-646
               

               
Cow position:
               
chr23:23034217-23034382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
163, 16
               

               
Conread position:
               
475-654
               

               
Cow position:
               
chr23:32621515-32621334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr23:2395374-2395551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr23:9131741-9131914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr23:26986045-26986224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr23:27860018-27859835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
475-657
               

               
Cow position:
               
chr23:21664525-21664350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
475-657
               

               
Cow position:
               
chr23:28574930-28574752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
163, 9
               

               
Conread position:
               
475-657
               

               
Cow position:
               
chr23:40965754-40965936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
163, 119
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr23:19269272-19269089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr23:39125194-39125382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
475-659
               

               
Cow position:
               
chr23:1510702-1510883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
475-660
               

               
Cow position:
               
chr23:2471231-2471045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
475-660
               

               
Cow position:
               
chr23:27526810-27526627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
475-660
               

               
Cow position:
               
chr23:38267181-38267358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
476-646
               

               
Cow position:
               
chr23:343950-344131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr23:1656117-1655939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 21
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr23:17792199-17792380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr23:30617251-30617434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr23:35239576-35239396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
476-660
               

               
Cow position:
               
chr23:3247813-3247631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
476-660
               

               
Cow position:
               
chr23:8698651-8698462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
476-662
               

               
Cow position:
               
chr23:9874888-9874694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
476-662
               

               
Cow position:
               
chr23:16447471-16447649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
477-656
               

               
Cow position:
               
chr23:1614432-1614611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
477-658
               

               
Cow position:
               
chr23:8293733-8293546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
477-660
               

               
Cow position:
               
chr23:23104267-23104446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
161, 98
               

               
Conread position:
               
478-641
               

               
Cow position:
               
chr23:7856986-7856822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
478-643
               

               
Cow position:
               
chr23:40494555-40494378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
478-656
               

               
Cow position:
               
chr23:18489875-18489702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
478-656
               

               
Cow position:
               
chr23:32479793-32479971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
478-658
               

               
Cow position:
               
chr23:4291579-4291399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
160, 110
               

               
Conread position:
               
478-658
               

               
Cow position:
               
chr23:26794691-26794868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 112
               

               
Conread position:
               
478-659
               

               
Cow position:
               
chr23:11369439-11369270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
478-683
               

               
Cow position:
               
chr23:39109160-39108954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
479-593
               

               
Cow position:
               
chr23:1429611-1429726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
479-597
               

               
Cow position:
               
chr23:12031627-12031513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
479-608
               

               
Cow position:
               
chr23:40969861-40969990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
479-642
               

               
Cow position:
               
chr23:39202852-39203012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
159, 18
               

               
Conread position:
               
479-656
               

               
Cow position:
               
chr23:9726317-9726495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
479-656
               

               
Cow position:
               
chr23:27849212-27849043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
159, 22
               

               
Conread position:
               
479-657
               

               
Cow position:
               
chr23:16689846-16690022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr23:1798340-1798155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 115
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr23:2110999-2110827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr23:4416063-4416243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr23:20557620-20557800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr23:39813725-39813542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
479-661
               

               
Cow position:
               
chr23:20397247-20397427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
159, 18
               

               
Conread position:
               
479-665
               

               
Cow position:
               
chr23:13836944-13836756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
140, 151
               

               
Conread position:
               
480-592
               

               
Cow position:
               
chr23:6042675-6042559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
480-655
               

               
Cow position:
               
chr23:534445-534275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
480-657
               

               
Cow position:
               
chr23:15099704-15099884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
480-657
               

               
Cow position:
               
chr23:33434885-33434706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
481-657
               

               
Cow position:
               
chr23:25087179-25087357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
482-656
               

               
Cow position:
               
chr23:1877680-1877849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
156, 20
               

               
Conread position:
               
482-658
               

               
Cow position:
               
chr23:29972616-29972432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
483-658
               

               
Cow position:
               
chr23:56938-57119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
483-658
               

               
Cow position:
               
chr23:3234559-3234737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
483-658
               

               
Cow position:
               
chr23:35527298-35527124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
155, 39
               

               
Conread position:
               
483-658
               

               
Cow position:
               
chr23:41348407-41348579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
483-660
               

               
Cow position:
               
chr23:18823200-18823032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
155, 19
               

               
Conread position:
               
483-661
               

               
Cow position:
               
chr23:18739999-18740177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
155, 14
               

               
Conread position:
               
484-591
               

               
Cow position:
               
chr23:25726557-25726453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
484-616
               

               
Cow position:
               
chr23:1725559-1725427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
484-618
               

               
Cow position:
               
chr23:2563881-2563748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
484-640
               

               
Cow position:
               
chr23:4090637-4090478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
484-652
               

               
Cow position:
               
chr23:9876781-9876948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
484-655
               

               
Cow position:
               
chr23:18739244-18739416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
484-656
               

               
Cow position:
               
chr23:1194280-1194445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
131, 7
               

               
Conread position:
               
484-656
               

               
Cow position:
               
chr23:20744365-20744546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
484-657
               

               
Cow position:
               
chr23:40487748-40487919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
484-657
               

               
Cow position:
               
chr23:40778479-40778310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr23:17462809-17462634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr23:28580364-28580542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr23:39056975-39056801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr23:10676072-10675894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr23:13520660-13520494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 43
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr23:19179150-19179332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr23:24929852-24930029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
485-646
               

               
Cow position:
               
chr23:3890356-3890518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
485-656
               

               
Cow position:
               
chr23:5426652-5426480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
485-658
               

               
Cow position:
               
chr23:306740-306567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 103
               

               
Conread position:
               
485-658
               

               
Cow position:
               
chr23:4521666-4521840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
485-658
               

               
Cow position:
               
chr23:33711977-33711805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 100
               

               
Conread position:
               
485-659
               

               
Cow position:
               
chr23:1337089-1337260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
486-570
               

               
Cow position:
               
chr23:13511968-13511884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
486-651
               

               
Cow position:
               
chr23:26975252-26975413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
486-656
               

               
Cow position:
               
chr23:22238606-22238775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr23:3835368-3835551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr23:4003864-4003691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr23:4803178-4803003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr23:19739348-19739521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 116
               

               
Conread position:
               
486-681
               

               
Cow position:
               
chr23:40951217-40951018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
487-625
               

               
Cow position:
               
chr23:40542057-40542193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
487-640
               

               
Cow position:
               
chr23:22529239-22529383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
487-644
               

               
Cow position:
               
chr23:2186849-2187006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
149, 107
               

               
Conread position:
               
487-656
               

               
Cow position:
               
chr23:17597636-17597473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
487-658
               

               
Cow position:
               
chr23:1884958-1885128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
488-653
               

               
Cow position:
               
chr23:20725479-20725638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
150, 87
               

               
Conread position:
               
488-654
               

               
Cow position:
               
chr23:21628376-21628209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
489-584
               

               
Cow position:
               
chr23:38846416-38846321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
489-658
               

               
Cow position:
               
chr23:10853258-10853090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
149, 50
               

               
Conread position:
               
490-603
               

               
Cow position:
               
chr23:16613395-16613508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
490-608
               

               
Cow position:
               
chr23:37436350-37436232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
490-628
               

               
Cow position:
               
chr23:1648050-1647915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
490-637
               

               
Cow position:
               
chr23:18387376-18387524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr23:187390-187223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr23:1759457-1759291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 75
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr23:3244704-3244869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 142
               

               
Conread position:
               
490-681
               

               
Cow position:
               
chr23:35512046-35512240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 178
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr23:16744752-16744593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 89
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr23:20596380-20596548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
116, 90
               

               
Conread position:
               
492-646
               

               
Cow position:
               
chr23:5436431-5436586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
492-656
               

               
Cow position:
               
chr23:22573698-22573862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
145, 96
               

               
Conread position:
               
492-658
               

               
Cow position:
               
chr23:164962-164804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
492-658
               

               
Cow position:
               
chr23:3979551-3979718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
492-660
               

               
Cow position:
               
chr23:25990230-25990395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
492-662
               

               
Cow position:
               
chr23:15743299-15743131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
146, 58
               

               
Conread position:
               
492-681
               

               
Cow position:
               
chr23:39267993-39267808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
144, 92
               

               
Conread position:
               
493-636
               

               
Cow position:
               
chr23:9761044-9760897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
82, 100
               

               
Conread position:
               
493-646
               

               
Cow position:
               
chr23:4505019-4504868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
493-658
               

               
Cow position:
               
chr23:1480849-1480684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 95
               

               
Conread position:
               
493-658
               

               
Cow position:
               
chr23:9387823-9387983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
493-658
               

               
Cow position:
               
chr23:38992889-38993045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 36
               

               
Conread position:
               
494-600
               

               
Cow position:
               
chr23:4252206-4252101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
494-658
               

               
Cow position:
               
chr23:13380915-13380754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
494-658
               

               
Cow position:
               
chr23:16582701-16582865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
144, 100
               

               
Conread position:
               
494-658
               

               
Cow position:
               
chr23:17012536-17012694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
494-658
               

               
Cow position:
               
chr23:35930154-35929995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
494-668
               

               
Cow position:
               
chr23:37066062-37065883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr23:36200605-36200449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
497-637
               

               
Cow position:
               
chr23:27307951-27307812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
497-643
               

               
Cow position:
               
chr23:1661431-1661569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
497-643
               

               
Cow position:
               
chr23:38738518-38738373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
141, 78
               

               
Conread position:
               
497-644
               

               
Cow position:
               
chr23:19295312-19295156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
497-646
               

               
Cow position:
               
chr23:21539360-21539211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 90
               

               
Conread position:
               
497-651
               

               
Cow position:
               
chr23:24809234-24809385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 79
               

               
Conread position:
               
497-654
               

               
Cow position:
               
chr23:799463-799620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
141, 91
               

               
Conread position:
               
497-655
               

               
Cow position:
               
chr23:25864491-25864649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
141, 108
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr23:5215709-5215870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr23:28529748-28529908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr23:40500893-40501051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr23:38233-38072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
139, 91
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr23:9734623-9734453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr23:29330513-29330352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr23:34356844-34356687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr23:37948892-37948731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 66
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr23:40737812-40737974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
497-660
               

               
Cow position:
               
chr23:11081461-11081299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 91
               

               
Conread position:
               
497-660
               

               
Cow position:
               
chr23:35656612-35656450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 79
               

               
Conread position:
               
497-661
               

               
Cow position:
               
chr23:13137736-13137895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
497-661
               

               
Cow position:
               
chr23:18611560-18611724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
497-661
               

               
Cow position:
               
chr23:30170593-30170746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
161, 12
               

               
Conread position:
               
497-681
               

               
Cow position:
               
chr23:31263103-31262919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
498-589
               

               
Cow position:
               
chr23:580400-580491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
498-646
               

               
Cow position:
               
chr23:7471746-7471605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
140, 37
               

               
Conread position:
               
498-654
               

               
Cow position:
               
chr23:28814581-28814425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
140, 96
               

               
Conread position:
               
498-656
               

               
Cow position:
               
chr23:5617777-5617620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
140, 95
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr23:5314730-5314572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr23:25699929-25699776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr23:40348444-40348600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
498-660
               

               
Cow position:
               
chr23:6672426-6672593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
498-660
               

               
Cow position:
               
chr23:10888470-10888317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 76
               

               
Conread position:
               
498-660
               

               
Cow position:
               
chr23:24718601-24718759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
140, 78
               

               
Conread position:
               
498-661
               

               
Cow position:
               
chr23:12138210-12138050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
498-666
               

               
Cow position:
               
chr23:5605467-5605294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 96
               

               
Conread position:
               
498-666
               

               
Cow position:
               
chr23:5612727-5612554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 96
               

               
Conread position:
               
499-646
               

               
Cow position:
               
chr23:16073730-16073575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
499-654
               

               
Cow position:
               
chr23:5881320-5881469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
499-658
               

               
Cow position:
               
chr23:33232499-33232657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
139, 89
               

               
Conread position:
               
499-660
               

               
Cow position:
               
chr23:16664202-16664360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 76
               

               
Conread position:
               
499-662
               

               
Cow position:
               
chr23:13410560-13410716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 13
               

               
Conread position:
               
499-667
               

               
Cow position:
               
chr23:10844760-10844591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
500-655
               

               
Cow position:
               
chr23:37993376-37993219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
500-658
               

               
Cow position:
               
chr23:39864857-39864697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 138
               

               
Conread position:
               
501-622
               

               
Cow position:
               
chr23:9237906-9238025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
501-622
               

               
Cow position:
               
chr23:39302893-39302773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
501-658
               

               
Cow position:
               
chr23:5436801-5436958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 94
               

               
Conread position:
               
501-658
               

               
Cow position:
               
chr23:29607273-29607121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
501-658
               

               
Cow position:
               
chr23:32126504-32126350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
501-688
               

               
Cow position:
               
chr23:3270498-3270313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
137, 31
               

               
Conread position:
               
502-654
               

               
Cow position:
               
chr23:769343-769493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
502-656
               

               
Cow position:
               
chr23:15056378-15056525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
502-657
               

               
Cow position:
               
chr23:12405623-12405775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
502-658
               

               
Cow position:
               
chr23:16780358-16780517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
504-658
               

               
Cow position:
               
chr23:21423962-21423812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
134, 81
               

               
Conread position:
               
504-658
               

               
Cow position:
               
chr23:41472821-41472666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
507-656
               

               
Cow position:
               
chr23:4343677-4343528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 87
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr23:18415864-18416006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
510-660
               

               
Cow position:
               
chr23:4972955-4972808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
512-657
               

               
Cow position:
               
chr23:24779352-24779497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 76
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr23:24700888-24701040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
521-658
               

               
Cow position:
               
chr23:1701353-1701216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 67
               

               
Conread position:
               
523-657
               

               
Cow position:
               
chr23:3983012-3983145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
523-681
               

               
Cow position:
               
chr23:6768086-6767929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
524-622
               

               
Cow position:
               
chr23:18978761-18978858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
525-658
               

               
Cow position:
               
chr23:38994412-38994278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
531-646
               

               
Cow position:
               
chr23:36307544-36307657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
532-658
               

               
Cow position:
               
chr23:20563865-20563741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 61
               

               
Conread position:
               
542-658
               

               
Cow position:
               
chr23:38118118-38118002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
664-797
               

               
Cow position:
               
chr23:18271912-18272046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
664-797
               

               
Cow position:
               
chr23:37098781-37098916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
664-798
               

               
Cow position:
               
chr23:13562436-13562301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 127
               
Show alignments to all cow chromosomes.