Cow genome map

Conread name: Tra1-TCH01C060056

Conread position: 223-479
Cow position: chr29:4245604-4245348 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 27

Conread position: 236-478
Cow position: chr29:16336409-16336163 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 109, 0

Conread position: 236-499
Cow position: chr29:13562345-13562077 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 30, 191

Conread position: 246-406
Cow position: chr29:27059376-27059216 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 104, 93

Conread position: 247-388
Cow position: chr29:2120037-2120178 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 44

Conread position: 446-658
Cow position: chr29:23819134-23819350 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 146

Conread position: 451-660
Cow position: chr29:27911838-27911629 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 27

Conread position: 451-660
Cow position: chr29:27927020-27926812 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 27

Conread position: 451-660
Cow position: chr29:31092694-31092487 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 27

Conread position: 453-656
Cow position: chr29:40350833-40351034 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 118

Conread position: 453-658
Cow position: chr29:38732396-38732193 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 10, 21

Conread position: 455-657
Cow position: chr29:9800902-9800691 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 12

Conread position: 455-661
Cow position: chr29:22534203-22533997 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 183, 15

Conread position: 466-660
Cow position: chr29:8605708-8605897 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 8

Conread position: 467-634
Cow position: chr29:20644150-20643980 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 60

Conread position: 468-583
Cow position: chr29:28616948-28616833 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 15

Conread position: 468-657
Cow position: chr29:34744404-34744584 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 10

Conread position: 468-658
Cow position: chr29:2219617-2219427 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 108

Conread position: 469-614
Cow position: chr29:22705268-22705121 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 28

Conread position: 470-656
Cow position: chr29:22613645-22613472 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 168, 27

Conread position: 470-660
Cow position: chr29:5568720-5568528 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 133

Conread position: 470-661
Cow position: chr29:12680384-12680192 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 168, 129

Conread position: 470-661
Cow position: chr29:24293095-24292904 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 145, 12

Conread position: 471-640
Cow position: chr29:5994864-5995036 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 7

Conread position: 471-654
Cow position: chr29:16609976-16609792 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 21, 7

Conread position: 472-652
Cow position: chr29:30227058-30227235 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 167, 11

Conread position: 472-658
Cow position: chr29:5520258-5520445 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 104

Conread position: 473-660
Cow position: chr29:44684320-44684137 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 11

Conread position: 474-656
Cow position: chr29:42646269-42646092 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 17

Conread position: 474-656
Cow position: chr29:42798175-42797998 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 141, 17

Conread position: 474-657
Cow position: chr29:25944072-25944256 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 164, 0

Conread position: 474-658
Cow position: chr29:1933346-1933531 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 71

Conread position: 475-622
Cow position: chr29:6337870-6337727 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 475-630
Cow position: chr29:659503-659351 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 101

Conread position: 475-637
Cow position: chr29:22720428-22720581 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 475-638
Cow position: chr29:16164212-16164375 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 37

Conread position: 475-642
Cow position: chr29:2070975-2071148 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 475-644
Cow position: chr29:24119276-24119446 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 114

Conread position: 475-655
Cow position: chr29:8163607-8163786 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 163, 16

Conread position: 475-655
Cow position: chr29:40112600-40112425 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 140, 91

Conread position: 475-656
Cow position: chr29:19949525-19949349 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 160, 27

Conread position: 475-658
Cow position: chr29:4121078-4120894 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 114

Conread position: 475-658
Cow position: chr29:14375659-14375841 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 163, 9

Conread position: 475-658
Cow position: chr29:22018967-22019147 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 22

Conread position: 475-658
Cow position: chr29:23874684-23874500 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 114

Conread position: 475-658
Cow position: chr29:42630339-42630161 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 88

Conread position: 475-661
Cow position: chr29:30294648-30294836 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 115

Conread position: 475-667
Cow position: chr29:8669572-8669390 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 476-573
Cow position: chr29:24981223-24981324 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 476-658
Cow position: chr29:22068521-22068700 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 162, 112

Conread position: 478-608
Cow position: chr29:26777229-26777099 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 111

Conread position: 478-621
Cow position: chr29:34483406-34483549 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 110

Conread position: 478-655
Cow position: chr29:28087893-28087718 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 89

Conread position: 478-656
Cow position: chr29:9709910-9709737 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 161, 24

Conread position: 478-656
Cow position: chr29:25288701-25288881 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 165

Conread position: 478-658
Cow position: chr29:4440989-4441164 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 160, 23

Conread position: 478-658
Cow position: chr29:14746999-14746820 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 100

Conread position: 478-658
Cow position: chr29:21196433-21196609 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 79

Conread position: 478-658
Cow position: chr29:34356189-34356008 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 117

Conread position: 478-658
Cow position: chr29:41531070-41530890 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 24, 110

Conread position: 478-660
Cow position: chr29:8798794-8798977 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 34

Conread position: 478-661
Cow position: chr29:16735444-16735260 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 160, 116

Conread position: 479-618
Cow position: chr29:31835484-31835353 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 479-654
Cow position: chr29:5046871-5046697 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 49

Conread position: 479-656
Cow position: chr29:936420-936249 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 96

Conread position: 479-657
Cow position: chr29:19910180-19909997 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 479-658
Cow position: chr29:23637459-23637638 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 11

Conread position: 479-658
Cow position: chr29:23678920-23678749 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 93

Conread position: 479-658
Cow position: chr29:25475150-25474963 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 33

Conread position: 480-580
Cow position: chr29:2720838-2720939 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 480-646
Cow position: chr29:42887189-42887021 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 11, 110

Conread position: 480-656
Cow position: chr29:25092319-25092148 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 135, 17

Conread position: 480-658
Cow position: chr29:6517447-6517269 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 104

Conread position: 480-658
Cow position: chr29:18449921-18450098 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 16, 109

Conread position: 480-658
Cow position: chr29:28420973-28420795 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 158, 108

Conread position: 480-658
Cow position: chr29:32894476-32894303 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 86

Conread position: 481-660
Cow position: chr29:34359606-34359783 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 96

Conread position: 481-661
Cow position: chr29:5408927-5409105 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 157, 101

Conread position: 483-619
Cow position: chr29:36080255-36080120 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 119

Conread position: 483-640
Cow position: chr29:4741176-4741332 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 483-656
Cow position: chr29:26631262-26631083 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 483-657
Cow position: chr29:17462566-17462739 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 96

Conread position: 483-661
Cow position: chr29:24605107-24604932 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 155, 14

Conread position: 484-581
Cow position: chr29:5147849-5147750 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 484-591
Cow position: chr29:25975315-25975425 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 484-646
Cow position: chr29:12025268-12025423 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 155, 13

Conread position: 484-656
Cow position: chr29:4070832-4070666 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 154, 92

Conread position: 484-658
Cow position: chr29:11894916-11894738 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 15, 108

Conread position: 484-658
Cow position: chr29:16200263-16200438 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 105

Conread position: 484-658
Cow position: chr29:17436958-17436791 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 484-658
Cow position: chr29:25793355-25793186 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 50

Conread position: 484-658
Cow position: chr29:26211266-26211092 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 18, 105

Conread position: 484-658
Cow position: chr29:32656650-32656473 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 112

Conread position: 484-660
Cow position: chr29:3711589-3711417 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 105

Conread position: 484-660
Cow position: chr29:32799491-32799674 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 484-661
Cow position: chr29:13028660-13028476 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 7

Conread position: 484-661
Cow position: chr29:35458556-35458735 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 105

Conread position: 485-618
Cow position: chr29:6716300-6716433 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 110

Conread position: 485-653
Cow position: chr29:29183934-29183767 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 153, 109

Conread position: 485-654
Cow position: chr29:23698181-23698022 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 153, 42

Conread position: 485-658
Cow position: chr29:14828017-14828188 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 32

Conread position: 485-660
Cow position: chr29:14577067-14576897 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 153, 12

Conread position: 485-661
Cow position: chr29:34675796-34675973 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 66

Conread position: 486-655
Cow position: chr29:44901451-44901619 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 152, 93

Conread position: 486-656
Cow position: chr29:22576967-22577137 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 103

Conread position: 486-658
Cow position: chr29:35292297-35292133 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 90

Conread position: 486-661
Cow position: chr29:29552058-29551882 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 110

Conread position: 486-661
Cow position: chr29:34832183-34832353 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 73, 129

Conread position: 487-646
Cow position: chr29:28715021-28715182 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 487-653
Cow position: chr29:38754728-38754892 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 15, 99

Conread position: 487-658
Cow position: chr29:31934589-31934419 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 81

Conread position: 487-660
Cow position: chr29:684968-685135 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 489-615
Cow position: chr29:7452448-7452326 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 489-658
Cow position: chr29:7040661-7040832 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 101

Conread position: 490-658
Cow position: chr29:501409-501237 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 8, 56

Conread position: 490-658
Cow position: chr29:2744063-2744227 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 148, 96

Conread position: 490-658
Cow position: chr29:33143150-33143314 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 148, 84

Conread position: 490-658
Cow position: chr29:35189815-35189647 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 95

Conread position: 490-660
Cow position: chr29:19363914-19363748 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 148, 85

Conread position: 491-591
Cow position: chr29:13085857-13085757 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 491-645
Cow position: chr29:4023201-4023051 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 147, 79

Conread position: 491-646
Cow position: chr29:35281677-35281516 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 109

Conread position: 491-656
Cow position: chr29:16290929-16290768 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 63

Conread position: 491-657
Cow position: chr29:11685375-11685208 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 98

Conread position: 491-657
Cow position: chr29:37618514-37618347 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 11, 98

Conread position: 491-658
Cow position: chr29:3549811-3549643 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 98

Conread position: 491-658
Cow position: chr29:16279182-16279027 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 149, 84

Conread position: 491-658
Cow position: chr29:26017295-26017462 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 148, 103

Conread position: 491-658
Cow position: chr29:30827614-30827446 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 98

Conread position: 491-658
Cow position: chr29:34297365-34297528 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 84

Conread position: 491-667
Cow position: chr29:30920195-30920372 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 51

Conread position: 492-653
Cow position: chr29:41094322-41094162 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 37

Conread position: 492-656
Cow position: chr29:21666290-21666129 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 83

Conread position: 492-660
Cow position: chr29:36531070-36530904 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 82

Conread position: 492-677
Cow position: chr29:40891503-40891680 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 493-656
Cow position: chr29:27042477-27042314 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 13

Conread position: 493-658
Cow position: chr29:10203972-10203812 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 146, 78

Conread position: 493-658
Cow position: chr29:36220747-36220574 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 494-658
Cow position: chr29:17297340-17297176 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 137
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 144, 94

Conread position: 494-658
Cow position: chr29:21706195-21706359 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 101

Conread position: 494-658
Cow position: chr29:29057381-29057215 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 83

Conread position: 495-656
Cow position: chr29:34274173-34274337 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 82

Conread position: 496-658
Cow position: chr29:2056260-2056101 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 68

Conread position: 496-658
Cow position: chr29:21645517-21645352 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 139

Conread position: 497-618
Cow position: chr29:774189-774069 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 497-656
Cow position: chr29:26540341-26540498 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 118, 77

Conread position: 497-656
Cow position: chr29:36781111-36781262 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 76

Conread position: 497-657
Cow position: chr29:35677342-35677502 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 91

Conread position: 497-657
Cow position: chr29:37771686-37771845 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 141, 65

Conread position: 497-658
Cow position: chr29:18878283-18878441 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 25

Conread position: 497-658
Cow position: chr29:24187864-24188025 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 141, 97

Conread position: 497-658
Cow position: chr29:25907451-25907286 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 71

Conread position: 497-658
Cow position: chr29:32655895-32656052 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 141, 83

Conread position: 497-658
Cow position: chr29:35259180-35259025 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 141, 33

Conread position: 497-660
Cow position: chr29:11081195-11081358 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 91

Conread position: 497-660
Cow position: chr29:31929185-31929027 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 497-661
Cow position: chr29:4484296-4484132 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 141, 77

Conread position: 497-661
Cow position: chr29:4648013-4648173 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 36

Conread position: 497-661
Cow position: chr29:20167622-20167460 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 140, 38

Conread position: 497-662
Cow position: chr29:16438573-16438744 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 497-663
Cow position: chr29:17301970-17301796 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 115

Conread position: 498-643
Cow position: chr29:8841251-8841390 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 140, 73

Conread position: 498-655
Cow position: chr29:36357326-36357169 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 90

Conread position: 498-657
Cow position: chr29:20626768-20626608 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 97

Conread position: 498-658
Cow position: chr29:396600-396446 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 74

Conread position: 498-658
Cow position: chr29:15947367-15947207 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 90

Conread position: 498-658
Cow position: chr29:19187224-19187066 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 72

Conread position: 498-658
Cow position: chr29:31489522-31489359 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 498-660
Cow position: chr29:9378833-9378674 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 77

Conread position: 498-678
Cow position: chr29:17110151-17109977 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 140, 28

Conread position: 499-653
Cow position: chr29:23734889-23735043 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 138, 95

Conread position: 499-658
Cow position: chr29:12783758-12783923 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 499-661
Cow position: chr29:33321546-33321383 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 88

Conread position: 499-662
Cow position: chr29:17222613-17222448 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 117, 51

Conread position: 500-643
Cow position: chr29:1011397-1011534 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 68

Conread position: 500-658
Cow position: chr29:23142136-23142294 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 94

Conread position: 500-658
Cow position: chr29:42405145-42404987 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 138, 88

Conread position: 500-662
Cow position: chr29:7955792-7955955 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 132

Conread position: 501-658
Cow position: chr29:3293138-3292988 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 137, 70

Conread position: 501-658
Cow position: chr29:7954769-7954930 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 103

Conread position: 502-656
Cow position: chr29:5893040-5892887 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 25

Conread position: 502-658
Cow position: chr29:41422715-41422871 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 136, 86

Conread position: 503-658
Cow position: chr29:30441132-30440977 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 136, 118

Conread position: 510-660
Cow position: chr29:23991643-23991792 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 89

Conread position: 512-627
Cow position: chr29:35663732-35663847 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 512-651
Cow position: chr29:7143483-7143342 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 512-658
Cow position: chr29:24365713-24365857 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 516-660
Cow position: chr29:24051198-24051343 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 80

Conread position: 516-661
Cow position: chr29:38582150-38582004 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 122, 78

Conread position: 518-660
Cow position: chr29:28257320-28257179 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 68

Conread position: 530-658
Cow position: chr29:21443170-21443298 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 108, 66

Conread position: 531-658
Cow position: chr29:28279120-28279247 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 57

Show alignments to all cow chromosomes.