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Cow genome map

           
Conread name:
           
Tra1-TCH01C060056
        

               
Conread position:
               
98-488
               

               
Cow position:
               
chr5:45222195-45221809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
117-407
               

               
Cow position:
               
chr5:27991396-27991098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
217-443
               

               
Cow position:
               
chr5:22847346-22847123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
132, 193
               

               
Conread position:
               
226-394
               

               
Cow position:
               
chr5:23587505-23587675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
235-400
               

               
Cow position:
               
chr5:67998202-67998362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
240-486
               

               
Cow position:
               
chr5:19004596-19004350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr5:17560559-17560404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 89
               

               
Conread position:
               
263-438
               

               
Cow position:
               
chr5:18778141-18777962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
263-468
               

               
Cow position:
               
chr5:47997347-47997141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 107
               

               
Conread position:
               
283-451
               

               
Cow position:
               
chr5:22173177-22173009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
295-405
               

               
Cow position:
               
chr5:67840085-67840196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
442-657
               

               
Cow position:
               
chr5:12504513-12504721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
443-660
               

               
Cow position:
               
chr5:51800328-51800545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 108
               

               
Conread position:
               
449-658
               

               
Cow position:
               
chr5:7177430-7177219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
454-656
               

               
Cow position:
               
chr5:57686475-57686667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
455-657
               

               
Cow position:
               
chr5:50713482-50713688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
458-658
               

               
Cow position:
               
chr5:36370538-36370347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
180, 16
               

               
Conread position:
               
463-657
               

               
Cow position:
               
chr5:41226742-41226937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
463-658
               

               
Cow position:
               
chr5:20345799-20345605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 122
               

               
Conread position:
               
464-658
               

               
Cow position:
               
chr5:40292680-40292871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
466-685
               

               
Cow position:
               
chr5:50858195-50857976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
468-617
               

               
Cow position:
               
chr5:45337164-45337311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
469-641
               

               
Cow position:
               
chr5:32672578-32672749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
155, 119
               

               
Conread position:
               
469-651
               

               
Cow position:
               
chr5:52001366-52001548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
469-654
               

               
Cow position:
               
chr5:41165337-41165160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
169, 106
               

               
Conread position:
               
469-658
               

               
Cow position:
               
chr5:12300168-12299979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
469-658
               

               
Cow position:
               
chr5:19052537-19052724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
169, 20
               

               
Conread position:
               
469-658
               

               
Cow position:
               
chr5:49821685-49821496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
169, 14
               

               
Conread position:
               
469-658
               

               
Cow position:
               
chr5:51053394-51053581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
469-658
               

               
Cow position:
               
chr5:53779408-53779223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
469-661
               

               
Cow position:
               
chr5:67950528-67950722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
470-623
               

               
Cow position:
               
chr5:72867308-72867154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
471-619
               

               
Cow position:
               
chr5:13471363-13471216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
471-657
               

               
Cow position:
               
chr5:47220744-47220557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
472-604
               

               
Cow position:
               
chr5:41757867-41757734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 118
               

               
Conread position:
               
472-653
               

               
Cow position:
               
chr5:19626831-19626651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
472-656
               

               
Cow position:
               
chr5:60207957-60207778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
472-658
               

               
Cow position:
               
chr5:15364520-15364337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
166, 12
               

               
Conread position:
               
473-654
               

               
Cow position:
               
chr5:26548894-26549068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
165, 5
               

               
Conread position:
               
473-658
               

               
Cow position:
               
chr5:31527141-31527327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
473-658
               

               
Cow position:
               
chr5:67634259-67634449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
473-659
               

               
Cow position:
               
chr5:56434134-56433948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
165, 107
               

               
Conread position:
               
473-661
               

               
Cow position:
               
chr5:64060697-64060510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
165, 115
               

               
Conread position:
               
474-604
               

               
Cow position:
               
chr5:42928359-42928491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
474-641
               

               
Cow position:
               
chr5:52125143-52125309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
474-646
               

               
Cow position:
               
chr5:35235436-35235609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
7, 115
               

               
Conread position:
               
474-657
               

               
Cow position:
               
chr5:29829638-29829820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
161, 34
               

               
Conread position:
               
474-657
               

               
Cow position:
               
chr5:54341012-54340835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
164, 9
               

               
Conread position:
               
474-658
               

               
Cow position:
               
chr5:26894462-26894651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
474-661
               

               
Cow position:
               
chr5:13270763-13270954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
475-591
               

               
Cow position:
               
chr5:17644095-17644215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
475-592
               

               
Cow position:
               
chr5:61840841-61840725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
475-637
               

               
Cow position:
               
chr5:52152858-52153019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
475-640
               

               
Cow position:
               
chr5:75711888-75712051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 93
               

               
Conread position:
               
475-645
               

               
Cow position:
               
chr5:1178202-1178035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
475-646
               

               
Cow position:
               
chr5:35990012-35989841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
475-646
               

               
Cow position:
               
chr5:56624264-56624437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
475-654
               

               
Cow position:
               
chr5:44796490-44796661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr5:2240739-2240921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr5:32976010-32975828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
97, 8
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr5:44901772-44901579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 141
               

               
Conread position:
               
475-657
               

               
Cow position:
               
chr5:24108806-24108991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
24, 116
               

               
Conread position:
               
475-657
               

               
Cow position:
               
chr5:37941557-37941738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr5:5760059-5760245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr5:28881431-28881624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr5:36868988-36868805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr5:48061856-48062049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr5:52853215-52853039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr5:54751058-54750875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr5:56613314-56613496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr5:57399004-57399185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr5:57556281-57556097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
475-660
               

               
Cow position:
               
chr5:24464988-24464813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
475-660
               

               
Cow position:
               
chr5:63241226-63241043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
161, 9
               

               
Conread position:
               
475-661
               

               
Cow position:
               
chr5:1766050-1766234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
475-661
               

               
Cow position:
               
chr5:43604386-43604204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
475-662
               

               
Cow position:
               
chr5:70678394-70678582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
476-646
               

               
Cow position:
               
chr5:43815568-43815737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
162, 117
               

               
Conread position:
               
476-655
               

               
Cow position:
               
chr5:11667935-11668114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 91
               

               
Conread position:
               
476-657
               

               
Cow position:
               
chr5:46499811-46499629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr5:2309310-2309488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr5:16937783-16937954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
476-660
               

               
Cow position:
               
chr5:70271113-70270932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 8
               

               
Conread position:
               
477-640
               

               
Cow position:
               
chr5:74050069-74049911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 20
               

               
Conread position:
               
477-642
               

               
Cow position:
               
chr5:44868603-44868441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
477-657
               

               
Cow position:
               
chr5:37090388-37090570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
477-658
               

               
Cow position:
               
chr5:25598077-25597900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
478-584
               

               
Cow position:
               
chr5:54375063-54374956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
478-607
               

               
Cow position:
               
chr5:52032062-52032189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
478-607
               

               
Cow position:
               
chr5:56578947-56578819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
478-622
               

               
Cow position:
               
chr5:43434755-43434899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 111
               

               
Conread position:
               
478-644
               

               
Cow position:
               
chr5:54404616-54404773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
478-652
               

               
Cow position:
               
chr5:51012248-51012073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
478-657
               

               
Cow position:
               
chr5:35246862-35247041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
478-657
               

               
Cow position:
               
chr5:56643317-56643136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
478-657
               

               
Cow position:
               
chr5:62341277-62341097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
478-658
               

               
Cow position:
               
chr5:17828232-17828411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
478-658
               

               
Cow position:
               
chr5:40122364-40122542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
478-658
               

               
Cow position:
               
chr5:58519168-58519348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
478-658
               

               
Cow position:
               
chr5:62011930-62011751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
478-660
               

               
Cow position:
               
chr5:3817441-3817622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 93
               

               
Conread position:
               
478-660
               

               
Cow position:
               
chr5:15770209-15770390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
478-660
               

               
Cow position:
               
chr5:41935409-41935589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 6
               

               
Conread position:
               
478-680
               

               
Cow position:
               
chr5:65140548-65140344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
479-590
               

               
Cow position:
               
chr5:44438466-44438578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
479-646
               

               
Cow position:
               
chr5:4280689-4280528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
159, 96
               

               
Conread position:
               
479-655
               

               
Cow position:
               
chr5:53824870-53825043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
159, 12
               

               
Conread position:
               
479-656
               

               
Cow position:
               
chr5:68537416-68537598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
7, 126
               

               
Conread position:
               
479-657
               

               
Cow position:
               
chr5:19811765-19811591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
159, 91
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr5:26149280-26149102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 5
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr5:39937359-39937183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
157, 12
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr5:48819522-48819341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
479-659
               

               
Cow position:
               
chr5:58401810-58401636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
159, 97
               

               
Conread position:
               
479-660
               

               
Cow position:
               
chr5:22957650-22957475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
479-661
               

               
Cow position:
               
chr5:2355765-2355584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
479-672
               

               
Cow position:
               
chr5:6245421-6245609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
479-681
               

               
Cow position:
               
chr5:60514778-60514981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 186
               

               
Conread position:
               
479-701
               

               
Cow position:
               
chr5:15991401-15991617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
159, 24
               

               
Conread position:
               
480-654
               

               
Cow position:
               
chr5:2827621-2827445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
480-656
               

               
Cow position:
               
chr5:19972565-19972737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
480-658
               

               
Cow position:
               
chr5:29828296-29828115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
480-658
               

               
Cow position:
               
chr5:33834285-33834110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 113
               

               
Conread position:
               
480-658
               

               
Cow position:
               
chr5:61914815-61914632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
480-660
               

               
Cow position:
               
chr5:11426991-11427167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
481-654
               

               
Cow position:
               
chr5:12562517-12562683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
157, 98
               

               
Conread position:
               
481-658
               

               
Cow position:
               
chr5:30562172-30562000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
481-661
               

               
Cow position:
               
chr5:12724148-12724327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
157, 107
               

               
Conread position:
               
481-661
               

               
Cow position:
               
chr5:50723291-50723110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
157, 113
               

               
Conread position:
               
481-661
               

               
Cow position:
               
chr5:52138181-52138001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
157, 72
               

               
Conread position:
               
482-621
               

               
Cow position:
               
chr5:37572314-37572452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
482-653
               

               
Cow position:
               
chr5:59958413-59958247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
482-658
               

               
Cow position:
               
chr5:44196689-44196861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
482-658
               

               
Cow position:
               
chr5:57101284-57101455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
483-597
               

               
Cow position:
               
chr5:17026436-17026323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
483-608
               

               
Cow position:
               
chr5:32086778-32086907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 109
               

               
Conread position:
               
483-656
               

               
Cow position:
               
chr5:8736036-8736209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 170
               

               
Conread position:
               
483-656
               

               
Cow position:
               
chr5:21829105-21828938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
483-656
               

               
Cow position:
               
chr5:29895412-29895241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
156, 99
               

               
Conread position:
               
483-657
               

               
Cow position:
               
chr5:30221536-30221709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
155, 110
               

               
Conread position:
               
483-658
               

               
Cow position:
               
chr5:33560498-33560666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
153, 14
               

               
Conread position:
               
483-658
               

               
Cow position:
               
chr5:34193381-34193209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
483-660
               

               
Cow position:
               
chr5:46681482-46681653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
154, 39
               

               
Conread position:
               
483-661
               

               
Cow position:
               
chr5:59384445-59384626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
484-608
               

               
Cow position:
               
chr5:55414200-55414319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
484-609
               

               
Cow position:
               
chr5:17253985-17254106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
484-635
               

               
Cow position:
               
chr5:56563988-56563846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
484-640
               

               
Cow position:
               
chr5:58689-58846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
484-646
               

               
Cow position:
               
chr5:45225582-45225737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
484-646
               

               
Cow position:
               
chr5:58487613-58487455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
154, 96
               

               
Conread position:
               
484-656
               

               
Cow position:
               
chr5:24995981-24996152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
110, 70
               

               
Conread position:
               
484-656
               

               
Cow position:
               
chr5:26147827-26147661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 13
               

               
Conread position:
               
484-657
               

               
Cow position:
               
chr5:56059824-56060001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr5:17999255-17999428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr5:18289360-18289190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr5:57755795-57755964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr5:61049574-61049400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr5:65760294-65760467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
153, 110
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr5:73424436-73424613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
484-659
               

               
Cow position:
               
chr5:46710823-46710648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
484-659
               

               
Cow position:
               
chr5:46715723-46715548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr5:19294277-19294461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr5:35208504-35208327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr5:47602048-47601877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
154, 67
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr5:64843724-64843905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr5:71579698-71579525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
484-662
               

               
Cow position:
               
chr5:49920165-49919987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
154, 28
               

               
Conread position:
               
484-678
               

               
Cow position:
               
chr5:34288013-34288205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
484-681
               

               
Cow position:
               
chr5:54875453-54875650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
154, 110
               

               
Conread position:
               
485-618
               

               
Cow position:
               
chr5:57561865-57561736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
485-641
               

               
Cow position:
               
chr5:1678830-1678674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
485-646
               

               
Cow position:
               
chr5:61593503-61593347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
485-656
               

               
Cow position:
               
chr5:30233150-30232978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
485-657
               

               
Cow position:
               
chr5:33273938-33273762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
485-657
               

               
Cow position:
               
chr5:50101138-50101305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
485-657
               

               
Cow position:
               
chr5:55799286-55799115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
485-658
               

               
Cow position:
               
chr5:42845358-42845525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 46
               

               
Conread position:
               
485-658
               

               
Cow position:
               
chr5:52108017-52108200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
485-660
               

               
Cow position:
               
chr5:22667310-22667137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
485-661
               

               
Cow position:
               
chr5:43858179-43858355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
153, 103
               

               
Conread position:
               
485-662
               

               
Cow position:
               
chr5:41530699-41530877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 6
               

               
Conread position:
               
486-618
               

               
Cow position:
               
chr5:59517020-59517149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
486-622
               

               
Cow position:
               
chr5:56428332-56428469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
486-655
               

               
Cow position:
               
chr5:25495112-25495287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
486-657
               

               
Cow position:
               
chr5:42064445-42064274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
152, 102
               

               
Conread position:
               
486-657
               

               
Cow position:
               
chr5:45405285-45405113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
486-657
               

               
Cow position:
               
chr5:46755365-46755201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
152, 20
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr5:24915286-24915459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr5:57062290-57062461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr5:57526688-57526856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
486-660
               

               
Cow position:
               
chr5:36038767-36038936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
487-594
               

               
Cow position:
               
chr5:18084227-18084333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
487-633
               

               
Cow position:
               
chr5:6876727-6876872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
487-654
               

               
Cow position:
               
chr5:39036019-39035852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 119
               

               
Conread position:
               
487-654
               

               
Cow position:
               
chr5:55749799-55749965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
151, 101
               

               
Conread position:
               
487-656
               

               
Cow position:
               
chr5:25035018-25035188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
487-657
               

               
Cow position:
               
chr5:55965656-55965825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
487-661
               

               
Cow position:
               
chr5:50578927-50579102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 97
               

               
Conread position:
               
488-661
               

               
Cow position:
               
chr5:32394840-32394663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
489-580
               

               
Cow position:
               
chr5:44751721-44751812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
489-656
               

               
Cow position:
               
chr5:59626738-59626901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
489-658
               

               
Cow position:
               
chr5:64140774-64140606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 96
               

               
Conread position:
               
489-660
               

               
Cow position:
               
chr5:43839762-43839933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
149, 99
               

               
Conread position:
               
489-660
               

               
Cow position:
               
chr5:54312836-54312667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
489-660
               

               
Cow position:
               
chr5:57687345-57687517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
150, 105
               

               
Conread position:
               
490-654
               

               
Cow position:
               
chr5:34918577-34918418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
148, 85
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr5:5016657-5016493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr5:11562494-11562654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr5:35459062-35459226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr5:46063728-46063565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr5:66972664-66972497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
490-662
               

               
Cow position:
               
chr5:71015651-71015822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
491-574
               

               
Cow position:
               
chr5:54067768-54067851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
491-618
               

               
Cow position:
               
chr5:7675925-7676046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
491-621
               

               
Cow position:
               
chr5:21374883-21375008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
491-639
               

               
Cow position:
               
chr5:40740093-40740240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
491-646
               

               
Cow position:
               
chr5:28660464-28660310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
144, 91
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr5:3582788-3582630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr5:20127140-20126979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
147, 34
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr5:57497192-57497354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
491-657
               

               
Cow position:
               
chr5:35969774-35969601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
491-657
               

               
Cow position:
               
chr5:40152720-40152554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
148, 103
               

               
Conread position:
               
491-658
               

               
Cow position:
               
chr5:22565853-22565687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
491-658
               

               
Cow position:
               
chr5:43611932-43611766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
491-658
               

               
Cow position:
               
chr5:53055325-53055493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
491-660
               

               
Cow position:
               
chr5:62996192-62996023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
147, 97
               

               
Conread position:
               
491-661
               

               
Cow position:
               
chr5:22102786-22102622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
147, 36
               

               
Conread position:
               
491-661
               

               
Cow position:
               
chr5:29599318-29599482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
491-661
               

               
Cow position:
               
chr5:47279808-47279625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
492-609
               

               
Cow position:
               
chr5:20387387-20387271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
492-656
               

               
Cow position:
               
chr5:4824387-4824218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
492-657
               

               
Cow position:
               
chr5:34976608-34976773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
492-658
               

               
Cow position:
               
chr5:20128287-20128120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
492-658
               

               
Cow position:
               
chr5:55956142-55955976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
143, 83
               

               
Conread position:
               
492-660
               

               
Cow position:
               
chr5:59662825-59662992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
146, 94
               

               
Conread position:
               
492-660
               

               
Cow position:
               
chr5:65941018-65941184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
492-661
               

               
Cow position:
               
chr5:14168078-14167907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 153
               

               
Conread position:
               
493-591
               

               
Cow position:
               
chr5:28719313-28719215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
493-646
               

               
Cow position:
               
chr5:12557056-12557207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
145, 82
               

               
Conread position:
               
493-655
               

               
Cow position:
               
chr5:46512537-46512697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
493-656
               

               
Cow position:
               
chr5:19752532-19752372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 71
               

               
Conread position:
               
493-657
               

               
Cow position:
               
chr5:47757003-47756841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 100
               

               
Conread position:
               
493-658
               

               
Cow position:
               
chr5:7057166-7057333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
92, 156
               

               
Conread position:
               
493-660
               

               
Cow position:
               
chr5:69383482-69383321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
146, 79
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr5:56860673-56860523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
495-656
               

               
Cow position:
               
chr5:14903835-14903998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr5:34347504-34347666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
143, 93
               

               
Conread position:
               
495-661
               

               
Cow position:
               
chr5:57086833-57086999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 93
               

               
Conread position:
               
496-637
               

               
Cow position:
               
chr5:2331907-2332042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
497-592
               

               
Cow position:
               
chr5:28456019-28456114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
497-622
               

               
Cow position:
               
chr5:15413325-15413201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
497-639
               

               
Cow position:
               
chr5:41639367-41639508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
497-641
               

               
Cow position:
               
chr5:30628926-30629070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 109
               

               
Conread position:
               
497-644
               

               
Cow position:
               
chr5:53554712-53554856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
497-646
               

               
Cow position:
               
chr5:14419790-14419930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
141, 56
               

               
Conread position:
               
497-646
               

               
Cow position:
               
chr5:18574409-18574252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
497-646
               

               
Cow position:
               
chr5:21339033-21339189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
497-648
               

               
Cow position:
               
chr5:32975331-32975482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
497-648
               

               
Cow position:
               
chr5:45854728-45854575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
497-651
               

               
Cow position:
               
chr5:56327499-56327644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
497-651
               

               
Cow position:
               
chr5:66582197-66582039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
497-654
               

               
Cow position:
               
chr5:35190333-35190182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
141, 77
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr5:5856087-5855928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr5:6438799-6438952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr5:34787799-34787644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr5:52164946-52165107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr5:75116343-75116503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
497-657
               

               
Cow position:
               
chr5:11769499-11769338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:2468986-2469139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:3677955-3677788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:12902146-12901985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:14550355-14550516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:17987666-17987826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:31975759-31975587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 119
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:43107024-43106869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:43846151-43846317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
111, 48
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:63939831-63939993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 155
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr5:73167786-73167943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
497-659
               

               
Cow position:
               
chr5:55783734-55783896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 90
               

               
Conread position:
               
497-659
               

               
Cow position:
               
chr5:60948359-60948198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
141, 78
               

               
Conread position:
               
497-660
               

               
Cow position:
               
chr5:21721249-21721405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 8
               

               
Conread position:
               
497-660
               

               
Cow position:
               
chr5:31648642-31648485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
497-660
               

               
Cow position:
               
chr5:54127514-54127356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
117, 82
               

               
Conread position:
               
497-661
               

               
Cow position:
               
chr5:16185607-16185442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
142, 91
               

               
Conread position:
               
497-661
               

               
Cow position:
               
chr5:36143205-36143048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
141, 34
               

               
Conread position:
               
497-681
               

               
Cow position:
               
chr5:20994862-20995039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
498-609
               

               
Cow position:
               
chr5:47870828-47870934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
498-623
               

               
Cow position:
               
chr5:74690026-74690150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
498-625
               

               
Cow position:
               
chr5:3492411-3492286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
498-636
               

               
Cow position:
               
chr5:25447113-25446976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
498-646
               

               
Cow position:
               
chr5:55943492-55943636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 92
               

               
Conread position:
               
498-654
               

               
Cow position:
               
chr5:17105071-17104922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
140, 72
               

               
Conread position:
               
498-654
               

               
Cow position:
               
chr5:35145561-35145401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 103
               

               
Conread position:
               
498-655
               

               
Cow position:
               
chr5:9486857-9487014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
140, 96
               

               
Conread position:
               
498-656
               

               
Cow position:
               
chr5:43403135-43402975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 76
               

               
Conread position:
               
498-656
               

               
Cow position:
               
chr5:56028319-56028471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
498-656
               

               
Cow position:
               
chr5:74887673-74887830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 77
               

               
Conread position:
               
498-657
               

               
Cow position:
               
chr5:54712842-54712996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr5:742954-742798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr5:29172217-29172055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr5:45845464-45845623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 77
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr5:55949452-55949611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr5:63172822-63172976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
498-661
               

               
Cow position:
               
chr5:20843172-20843331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
498-661
               

               
Cow position:
               
chr5:47888504-47888667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
498-661
               

               
Cow position:
               
chr5:59335999-59335834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
498-662
               

               
Cow position:
               
chr5:30492565-30492731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
498-681
               

               
Cow position:
               
chr5:27084525-27084344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
137, 90
               

               
Conread position:
               
499-617
               

               
Cow position:
               
chr5:62544062-62543949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
499-656
               

               
Cow position:
               
chr5:73253630-73253478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
499-658
               

               
Cow position:
               
chr5:3772067-3771914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
499-658
               

               
Cow position:
               
chr5:7012624-7012782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
499-658
               

               
Cow position:
               
chr5:55756188-55756350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 89
               

               
Conread position:
               
499-658
               

               
Cow position:
               
chr5:57447439-57447598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
139, 95
               

               
Conread position:
               
499-658
               

               
Cow position:
               
chr5:61580505-61580349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
499-660
               

               
Cow position:
               
chr5:20288033-20288197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
499-660
               

               
Cow position:
               
chr5:30247300-30247456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
499-660
               

               
Cow position:
               
chr5:44810012-44810173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
139, 89
               

               
Conread position:
               
499-662
               

               
Cow position:
               
chr5:47316750-47316911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
499-667
               

               
Cow position:
               
chr5:69765809-69765975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
500-628
               

               
Cow position:
               
chr5:50703823-50703950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
500-640
               

               
Cow position:
               
chr5:22608863-22608727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
500-656
               

               
Cow position:
               
chr5:30253964-30253811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
500-657
               

               
Cow position:
               
chr5:66659738-66659578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
500-658
               

               
Cow position:
               
chr5:718373-718218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 79
               

               
Conread position:
               
500-658
               

               
Cow position:
               
chr5:39447301-39447467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
500-660
               

               
Cow position:
               
chr5:30276911-30276756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
500-661
               

               
Cow position:
               
chr5:12760896-12761054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
138, 85
               

               
Conread position:
               
501-609
               

               
Cow position:
               
chr5:54554962-54555069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
501-651
               

               
Cow position:
               
chr5:63763888-63763741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
501-657
               

               
Cow position:
               
chr5:11539829-11539981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 93
               

               
Conread position:
               
501-658
               

               
Cow position:
               
chr5:18062087-18062251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 94
               

               
Conread position:
               
501-658
               

               
Cow position:
               
chr5:19561223-19561380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
137, 87
               

               
Conread position:
               
501-658
               

               
Cow position:
               
chr5:35228921-35229070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
502-656
               

               
Cow position:
               
chr5:60523949-60523802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
136, 66
               

               
Conread position:
               
502-658
               

               
Cow position:
               
chr5:41885136-41884987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
502-658
               

               
Cow position:
               
chr5:44722291-44722444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
502-658
               

               
Cow position:
               
chr5:71445614-71445458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 83
               

               
Conread position:
               
502-661
               

               
Cow position:
               
chr5:29256486-29256643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
155, 91
               

               
Conread position:
               
503-658
               

               
Cow position:
               
chr5:65776156-65776317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
503-661
               

               
Cow position:
               
chr5:44734506-44734660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
503-667
               

               
Cow position:
               
chr5:72045456-72045618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
504-658
               

               
Cow position:
               
chr5:67932246-67932404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
505-660
               

               
Cow position:
               
chr5:20779180-20779332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
506-658
               

               
Cow position:
               
chr5:35513439-35513283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr5:69682130-69682281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr5:53947116-53946961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
507-662
               

               
Cow position:
               
chr5:52778347-52778503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
508-658
               

               
Cow position:
               
chr5:16939375-16939526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
6, 81
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr5:6695764-6695615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 119
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr5:17062864-17063013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
509-660
               

               
Cow position:
               
chr5:16668908-16668763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
129, 59
               

               
Conread position:
               
510-655
               

               
Cow position:
               
chr5:30035283-30035138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 78
               

               
Conread position:
               
512-656
               

               
Cow position:
               
chr5:26097502-26097359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
126, 81
               

               
Conread position:
               
512-656
               

               
Cow position:
               
chr5:54753037-54753181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr5:20812761-20812614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr5:38040356-38040496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr5:53980540-53980686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 76
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr5:65745556-65745697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
126, 64
               

               
Conread position:
               
512-660
               

               
Cow position:
               
chr5:51233812-51233953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
515-660
               

               
Cow position:
               
chr5:62572740-62572597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 54
               

               
Conread position:
               
522-658
               

               
Cow position:
               
chr5:32935947-32935812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
536-658
               

               
Cow position:
               
chr5:46749637-46749758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
102, 36
               

               
Conread position:
               
664-798
               

               
Cow position:
               
chr5:31568303-31568167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
692-797
               

               
Cow position:
               
chr5:22172982-22172876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               
Show alignments to all cow chromosomes.