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Cow genome map

           
Conread name:
           
Tra1-TCH01C060056
        

               
Conread position:
               
7-102
               

               
Cow position:
               
chr9:60226912-60226820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
242-469
               

               
Cow position:
               
chr9:56293912-56294139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
112, 108
               

               
Conread position:
               
246-407
               

               
Cow position:
               
chr9:45406536-45406698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
256-502
               

               
Cow position:
               
chr9:5147706-5147449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 220
               

               
Conread position:
               
282-494
               

               
Cow position:
               
chr9:64594752-64594545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
289-452
               

               
Cow position:
               
chr9:50822738-50822574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 122
               

               
Conread position:
               
431-657
               

               
Cow position:
               
chr9:151629-151854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
207, 163
               

               
Conread position:
               
448-660
               

               
Cow position:
               
chr9:32052050-32052265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
455-659
               

               
Cow position:
               
chr9:32662249-32662042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
456-658
               

               
Cow position:
               
chr9:35466730-35466535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
157, 34
               

               
Conread position:
               
464-646
               

               
Cow position:
               
chr9:31625926-31626109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
465-658
               

               
Cow position:
               
chr9:8467857-8468044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
467-658
               

               
Cow position:
               
chr9:61019563-61019375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
171, 7
               

               
Conread position:
               
468-657
               

               
Cow position:
               
chr9:34195997-34196180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
171, 16
               

               
Conread position:
               
469-605
               

               
Cow position:
               
chr9:58979206-58979343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
469-653
               

               
Cow position:
               
chr9:19034155-19034339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
469-658
               

               
Cow position:
               
chr9:8998152-8998336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
470-656
               

               
Cow position:
               
chr9:37198930-37199112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
168, 33
               

               
Conread position:
               
470-661
               

               
Cow position:
               
chr9:20017198-20017389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
470-661
               

               
Cow position:
               
chr9:43679925-43680111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
168, 35
               

               
Conread position:
               
471-655
               

               
Cow position:
               
chr9:41644955-41644766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
471-658
               

               
Cow position:
               
chr9:31346750-31346937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
471-661
               

               
Cow position:
               
chr9:28772942-28773129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
471-662
               

               
Cow position:
               
chr9:37016704-37016890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
472-622
               

               
Cow position:
               
chr9:63710960-63711111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
472-637
               

               
Cow position:
               
chr9:20755959-20755791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
472-657
               

               
Cow position:
               
chr9:19657170-19656990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
166, 55
               

               
Conread position:
               
474-591
               

               
Cow position:
               
chr9:38962258-38962140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
474-618
               

               
Cow position:
               
chr9:28866286-28866144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
474-656
               

               
Cow position:
               
chr9:13169858-13169678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
474-656
               

               
Cow position:
               
chr9:35832811-35832634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
474-657
               

               
Cow position:
               
chr9:6397979-6397798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
164, 23
               

               
Conread position:
               
474-657
               

               
Cow position:
               
chr9:24000951-24000772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
474-658
               

               
Cow position:
               
chr9:12355591-12355773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
474-658
               

               
Cow position:
               
chr9:28315227-28315416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
474-658
               

               
Cow position:
               
chr9:35933013-35932827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
474-660
               

               
Cow position:
               
chr9:6954447-6954260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
164, 120
               

               
Conread position:
               
474-660
               

               
Cow position:
               
chr9:26715056-26715244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
474-661
               

               
Cow position:
               
chr9:20828709-20828897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
475-592
               

               
Cow position:
               
chr9:41995558-41995676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
475-617
               

               
Cow position:
               
chr9:60138604-60138740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
475-622
               

               
Cow position:
               
chr9:5399267-5399416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
475-633
               

               
Cow position:
               
chr9:34399478-34399632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
475-655
               

               
Cow position:
               
chr9:44793293-44793120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr9:6237684-6237508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr9:11380837-11380661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr9:26279365-26279184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr9:28747708-28747535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
475-656
               

               
Cow position:
               
chr9:34286607-34286784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
163, 26
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr9:5327069-5327245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
163, 91
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr9:6446910-6447095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr9:7611982-7611805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr9:9091303-9091118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
475-658
               

               
Cow position:
               
chr9:44709641-44709816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
475-660
               

               
Cow position:
               
chr9:27308071-27307893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
475-661
               

               
Cow position:
               
chr9:4629915-4630094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
475-661
               

               
Cow position:
               
chr9:8573192-8573384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
476-657
               

               
Cow position:
               
chr9:35028358-35028179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
162, 21
               

               
Conread position:
               
476-657
               

               
Cow position:
               
chr9:37951091-37950911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
162, 21
               

               
Conread position:
               
476-657
               

               
Cow position:
               
chr9:47510763-47510584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr9:8613404-8613224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
162, 15
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr9:9724074-9723889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr9:39148890-39149066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 95
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr9:54677068-54677251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
476-681
               

               
Cow position:
               
chr9:34423426-34423630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
162, 112
               

               
Conread position:
               
477-591
               

               
Cow position:
               
chr9:38792820-38792938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
477-649
               

               
Cow position:
               
chr9:62859490-62859661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
161, 76
               

               
Conread position:
               
477-655
               

               
Cow position:
               
chr9:53323977-53323800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
161, 26
               

               
Conread position:
               
477-658
               

               
Cow position:
               
chr9:13744124-13743943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
161, 7
               

               
Conread position:
               
477-658
               

               
Cow position:
               
chr9:35295501-35295677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
477-658
               

               
Cow position:
               
chr9:40215058-40215234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
478-584
               

               
Cow position:
               
chr9:36849440-36849543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
478-591
               

               
Cow position:
               
chr9:48808956-48809069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
478-597
               

               
Cow position:
               
chr9:48016801-48016918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
478-631
               

               
Cow position:
               
chr9:16770800-16770960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
478-644
               

               
Cow position:
               
chr9:20394506-20394342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
478-646
               

               
Cow position:
               
chr9:7543448-7543288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
478-651
               

               
Cow position:
               
chr9:50647876-50648047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
478-656
               

               
Cow position:
               
chr9:6192650-6192475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
478-656
               

               
Cow position:
               
chr9:38624817-38624639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
478-656
               

               
Cow position:
               
chr9:45141785-45141615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
160, 24
               

               
Conread position:
               
478-657
               

               
Cow position:
               
chr9:5772871-5772691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
478-657
               

               
Cow position:
               
chr9:11309668-11309846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
159, 34
               

               
Conread position:
               
478-657
               

               
Cow position:
               
chr9:50977446-50977267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
160, 110
               

               
Conread position:
               
478-658
               

               
Cow position:
               
chr9:42061901-42062086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
478-658
               

               
Cow position:
               
chr9:62724351-62724522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
478-660
               

               
Cow position:
               
chr9:28156510-28156682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
478-660
               

               
Cow position:
               
chr9:33584875-33584695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
478-660
               

               
Cow position:
               
chr9:55013533-55013342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
479-621
               

               
Cow position:
               
chr9:31215891-31216029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
479-637
               

               
Cow position:
               
chr9:3946335-3946183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
479-646
               

               
Cow position:
               
chr9:45170576-45170406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
479-647
               

               
Cow position:
               
chr9:4263278-4263114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
479-653
               

               
Cow position:
               
chr9:30194822-30194993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 91
               

               
Conread position:
               
479-656
               

               
Cow position:
               
chr9:33822927-33823103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr9:5456358-5456188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
158, 11
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr9:36457807-36457986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
159, 108
               

               
Conread position:
               
479-660
               

               
Cow position:
               
chr9:1884331-1884141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr9:32019517-32019347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
480-654
               

               
Cow position:
               
chr9:8537118-8537291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
158, 107
               

               
Conread position:
               
480-656
               

               
Cow position:
               
chr9:11098639-11098467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
158, 94
               

               
Conread position:
               
480-660
               

               
Cow position:
               
chr9:52510929-52511108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
481-580
               

               
Cow position:
               
chr9:5162521-5162421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
481-653
               

               
Cow position:
               
chr9:19771173-19771344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
481-656
               

               
Cow position:
               
chr9:34264896-34265080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
481-658
               

               
Cow position:
               
chr9:52763940-52763773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
157, 46
               

               
Conread position:
               
482-644
               

               
Cow position:
               
chr9:48367713-48367553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
482-658
               

               
Cow position:
               
chr9:8901418-8901240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 109
               

               
Conread position:
               
482-661
               

               
Cow position:
               
chr9:11950218-11950039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
483-656
               

               
Cow position:
               
chr9:22447480-22447309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
483-656
               

               
Cow position:
               
chr9:26388031-26388193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
483-657
               

               
Cow position:
               
chr9:55892451-55892279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 14
               

               
Conread position:
               
483-658
               

               
Cow position:
               
chr9:12280786-12280958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
12, 90
               

               
Conread position:
               
483-658
               

               
Cow position:
               
chr9:17785754-17785579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
160, 111
               

               
Conread position:
               
483-658
               

               
Cow position:
               
chr9:34917362-34917198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
155, 90
               

               
Conread position:
               
483-660
               

               
Cow position:
               
chr9:34697487-34697310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
155, 105
               

               
Conread position:
               
483-663
               

               
Cow position:
               
chr9:59586129-59586304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
484-622
               

               
Cow position:
               
chr9:9431878-9432013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
484-654
               

               
Cow position:
               
chr9:6189546-6189382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
484-655
               

               
Cow position:
               
chr9:44526924-44527101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 175
               

               
Conread position:
               
484-655
               

               
Cow position:
               
chr9:54640002-54639835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
484-656
               

               
Cow position:
               
chr9:23956161-23955995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
131, 92
               

               
Conread position:
               
484-656
               

               
Cow position:
               
chr9:41728077-41728243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:8645081-8645253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
152, 7
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:16115790-16115621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:16811845-16811667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:17027011-17027184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:20901304-20901141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:25375917-25375749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
154, 51
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:26102551-26102715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:32858829-32858647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:34760550-34760377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
154, 90
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:53632113-53631936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
484-658
               

               
Cow position:
               
chr9:60741368-60741197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr9:5104596-5104414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 175
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr9:11447991-11447819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
154, 98
               

               
Conread position:
               
484-660
               

               
Cow position:
               
chr9:40507778-40507608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
484-661
               

               
Cow position:
               
chr9:32670129-32669956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
484-682
               

               
Cow position:
               
chr9:23840591-23840384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
485-578
               

               
Cow position:
               
chr9:30653240-30653147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
485-608
               

               
Cow position:
               
chr9:8051021-8050898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 110
               

               
Conread position:
               
485-621
               

               
Cow position:
               
chr9:38370292-38370426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
485-622
               

               
Cow position:
               
chr9:6726864-6727000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
485-643
               

               
Cow position:
               
chr9:26578394-26578230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
485-654
               

               
Cow position:
               
chr9:34344426-34344595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
153, 109
               

               
Conread position:
               
485-656
               

               
Cow position:
               
chr9:8834313-8834142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
485-657
               

               
Cow position:
               
chr9:9573137-9573309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
98, 117
               

               
Conread position:
               
485-658
               

               
Cow position:
               
chr9:32676494-32676664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
485-658
               

               
Cow position:
               
chr9:35403396-35403570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
485-658
               

               
Cow position:
               
chr9:36624110-36623938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
485-660
               

               
Cow position:
               
chr9:26477028-26477205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
485-667
               

               
Cow position:
               
chr9:20322275-20322096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
486-654
               

               
Cow position:
               
chr9:5068655-5068824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
486-657
               

               
Cow position:
               
chr9:6839814-6839979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr9:14738070-14738236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 84
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr9:15806109-15805936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr9:30137942-30138106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 11
               

               
Conread position:
               
486-658
               

               
Cow position:
               
chr9:38941619-38941445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 104
               

               
Conread position:
               
486-661
               

               
Cow position:
               
chr9:34410575-34410405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 48
               

               
Conread position:
               
487-656
               

               
Cow position:
               
chr9:1917801-1917964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 83
               

               
Conread position:
               
487-657
               

               
Cow position:
               
chr9:33838488-33838327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
489-661
               

               
Cow position:
               
chr9:46344745-46344927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
490-597
               

               
Cow position:
               
chr9:6435806-6435694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
490-628
               

               
Cow position:
               
chr9:34875351-34875207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
490-646
               

               
Cow position:
               
chr9:35049301-35049455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
490-656
               

               
Cow position:
               
chr9:26394526-26394364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
148, 85
               

               
Conread position:
               
490-657
               

               
Cow position:
               
chr9:6205523-6205355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr9:5110678-5110845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
148, 96
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr9:31359429-31359591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr9:56827294-56827463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
490-662
               

               
Cow position:
               
chr9:13993585-13993757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
148, 88
               

               
Conread position:
               
490-671
               

               
Cow position:
               
chr9:63185876-63185695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
491-646
               

               
Cow position:
               
chr9:58440561-58440400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
491-654
               

               
Cow position:
               
chr9:52130834-52130993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
491-655
               

               
Cow position:
               
chr9:59897419-59897577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
147, 91
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr9:9459812-9459969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
147, 73
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr9:27279129-27279294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
145, 103
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr9:34024522-34024684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
147, 79
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr9:36627945-36628103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
147, 77
               

               
Conread position:
               
491-656
               

               
Cow position:
               
chr9:51620267-51620430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
491-658
               

               
Cow position:
               
chr9:13945424-13945593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
491-658
               

               
Cow position:
               
chr9:33597796-33597973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
491-658
               

               
Cow position:
               
chr9:34283778-34283940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 25
               

               
Conread position:
               
491-658
               

               
Cow position:
               
chr9:41416152-41416320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
491-658
               

               
Cow position:
               
chr9:51891073-51891233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
491-658
               

               
Cow position:
               
chr9:63134212-63134382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 105
               

               
Conread position:
               
491-659
               

               
Cow position:
               
chr9:3573286-3573454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
491-660
               

               
Cow position:
               
chr9:2397633-2397796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
147, 80
               

               
Conread position:
               
491-660
               

               
Cow position:
               
chr9:20579766-20579605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
491-660
               

               
Cow position:
               
chr9:28718539-28718701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
491-662
               

               
Cow position:
               
chr9:8767591-8767424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 17
               

               
Conread position:
               
492-578
               

               
Cow position:
               
chr9:18082050-18081964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
492-637
               

               
Cow position:
               
chr9:29091594-29091738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
492-652
               

               
Cow position:
               
chr9:5342422-5342266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
146, 81
               

               
Conread position:
               
492-656
               

               
Cow position:
               
chr9:13670460-13670618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
123, 76
               

               
Conread position:
               
492-657
               

               
Cow position:
               
chr9:1878174-1878016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
492-658
               

               
Cow position:
               
chr9:15215866-15215700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
146, 96
               

               
Conread position:
               
492-658
               

               
Cow position:
               
chr9:17769145-17769305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
146, 84
               

               
Conread position:
               
492-658
               

               
Cow position:
               
chr9:21292583-21292421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
146, 76
               

               
Conread position:
               
492-658
               

               
Cow position:
               
chr9:34279235-34279066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
492-660
               

               
Cow position:
               
chr9:3847218-3847391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
492-660
               

               
Cow position:
               
chr9:34375103-34374935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
143, 96
               

               
Conread position:
               
492-660
               

               
Cow position:
               
chr9:57642337-57642496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
493-606
               

               
Cow position:
               
chr9:56317897-56318009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
493-655
               

               
Cow position:
               
chr9:55284516-55284360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
493-656
               

               
Cow position:
               
chr9:28726904-28726739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
493-657
               

               
Cow position:
               
chr9:13141353-13141524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
493-657
               

               
Cow position:
               
chr9:18425736-18425898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
493-657
               

               
Cow position:
               
chr9:27261568-27261404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
145, 101
               

               
Conread position:
               
493-657
               

               
Cow position:
               
chr9:49679935-49680100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
493-657
               

               
Cow position:
               
chr9:52638346-52638181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
493-658
               

               
Cow position:
               
chr9:33114164-33114333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
493-658
               

               
Cow position:
               
chr9:34362561-34362725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
144, 90
               

               
Conread position:
               
493-658
               

               
Cow position:
               
chr9:36634329-36634494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 95
               

               
Conread position:
               
493-658
               

               
Cow position:
               
chr9:63785085-63784927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
494-656
               

               
Cow position:
               
chr9:24887031-24887191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 81
               

               
Conread position:
               
494-658
               

               
Cow position:
               
chr9:41282838-41283002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
144, 94
               

               
Conread position:
               
494-661
               

               
Cow position:
               
chr9:13722315-13722147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 100
               

               
Conread position:
               
496-662
               

               
Cow position:
               
chr9:30665172-30664997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
497-614
               

               
Cow position:
               
chr9:58232495-58232379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
497-618
               

               
Cow position:
               
chr9:48344069-48343949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
497-637
               

               
Cow position:
               
chr9:2984897-2985036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
497-637
               

               
Cow position:
               
chr9:52651663-52651524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 97
               

               
Conread position:
               
497-642
               

               
Cow position:
               
chr9:34355948-34355806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
141, 66
               

               
Conread position:
               
497-645
               

               
Cow position:
               
chr9:47469113-47469253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
141, 67
               

               
Conread position:
               
497-646
               

               
Cow position:
               
chr9:16826373-16826220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
497-646
               

               
Cow position:
               
chr9:20355698-20355842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
497-651
               

               
Cow position:
               
chr9:62136288-62136134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
139, 97
               

               
Conread position:
               
497-653
               

               
Cow position:
               
chr9:1403707-1403552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
497-653
               

               
Cow position:
               
chr9:33033902-33034056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
141, 84
               

               
Conread position:
               
497-653
               

               
Cow position:
               
chr9:45711174-45711018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
497-655
               

               
Cow position:
               
chr9:44822493-44822340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
140, 76
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr9:12337729-12337887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 67
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr9:17840850-17840693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
118, 97
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr9:21460324-21460166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
497-657
               

               
Cow position:
               
chr9:12786647-12786487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
141, 91
               

               
Conread position:
               
497-657
               

               
Cow position:
               
chr9:20406484-20406638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
497-657
               

               
Cow position:
               
chr9:24748505-24748665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
97, 105
               

               
Conread position:
               
497-657
               

               
Cow position:
               
chr9:34276384-34276224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
497-657
               

               
Cow position:
               
chr9:47517026-47517185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 104
               

               
Conread position:
               
497-657
               

               
Cow position:
               
chr9:52755023-52754864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
140, 88
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr9:1751158-1751325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr9:31344781-31344620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr9:34484419-34484582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 109
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr9:34964905-34964756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr9:50310934-50310775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr9:53061482-53061649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
497-660
               

               
Cow position:
               
chr9:32307405-32307242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
138, 91
               

               
Conread position:
               
497-660
               

               
Cow position:
               
chr9:40984333-40984494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
141, 68
               

               
Conread position:
               
498-602
               

               
Cow position:
               
chr9:35491261-35491365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 97
               

               
Conread position:
               
498-630
               

               
Cow position:
               
chr9:48017937-48017806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
498-641
               

               
Cow position:
               
chr9:901611-901470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
498-645
               

               
Cow position:
               
chr9:26057599-26057456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 38
               

               
Conread position:
               
498-651
               

               
Cow position:
               
chr9:44625049-44625192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
498-655
               

               
Cow position:
               
chr9:51566668-51566511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
138, 90
               

               
Conread position:
               
498-656
               

               
Cow position:
               
chr9:12773524-12773675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
140, 77
               

               
Conread position:
               
498-657
               

               
Cow position:
               
chr9:1984654-1984494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr9:21780753-21780911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr9:44396489-44396649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
138, 89
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr9:46981392-46981240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr9:47214720-47214558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
498-658
               

               
Cow position:
               
chr9:56032487-56032328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 76
               

               
Conread position:
               
498-659
               

               
Cow position:
               
chr9:40603497-40603656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
140, 77
               

               
Conread position:
               
498-660
               

               
Cow position:
               
chr9:27345759-27345595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 105
               

               
Conread position:
               
499-633
               

               
Cow position:
               
chr9:33201217-33201085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
499-637
               

               
Cow position:
               
chr9:12495045-12495182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
499-642
               

               
Cow position:
               
chr9:33389198-33389056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
139, 102
               

               
Conread position:
               
499-652
               

               
Cow position:
               
chr9:60395218-60395067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
499-654
               

               
Cow position:
               
chr9:17872276-17872127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
136, 71
               

               
Conread position:
               
499-655
               

               
Cow position:
               
chr9:39709684-39709841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
499-657
               

               
Cow position:
               
chr9:61286592-61286748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
499-658
               

               
Cow position:
               
chr9:11123649-11123498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
138, 76
               

               
Conread position:
               
499-658
               

               
Cow position:
               
chr9:27495062-27495224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
499-658
               

               
Cow position:
               
chr9:44759096-44758944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
139, 72
               

               
Conread position:
               
499-660
               

               
Cow position:
               
chr9:1729856-1729685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
500-660
               

               
Cow position:
               
chr9:2037268-2037431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
500-661
               

               
Cow position:
               
chr9:54598505-54598664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
500-661
               

               
Cow position:
               
chr9:63169801-63169963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 101
               

               
Conread position:
               
501-646
               

               
Cow position:
               
chr9:39142682-39142823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
502-644
               

               
Cow position:
               
chr9:55117916-55118060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
502-658
               

               
Cow position:
               
chr9:9243378-9243538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
502-681
               

               
Cow position:
               
chr9:48282028-48282210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 107
               

               
Conread position:
               
503-656
               

               
Cow position:
               
chr9:34707475-34707327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
504-646
               

               
Cow position:
               
chr9:20712674-20712811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 78
               

               
Conread position:
               
504-656
               

               
Cow position:
               
chr9:12226149-12225993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 120
               

               
Conread position:
               
504-656
               

               
Cow position:
               
chr9:30123766-30123914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
504-658
               

               
Cow position:
               
chr9:33541887-33542042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
506-657
               

               
Cow position:
               
chr9:61738759-61738908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
132, 62
               

               
Conread position:
               
507-657
               

               
Cow position:
               
chr9:22443784-22443641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr9:9753563-9753404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr9:9815252-9815400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr9:54986322-54986168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
134, 81
               

               
Conread position:
               
508-658
               

               
Cow position:
               
chr9:14357252-14357402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr9:37955333-37955184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
129, 79
               

               
Conread position:
               
510-651
               

               
Cow position:
               
chr9:31514093-31513952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
510-658
               

               
Cow position:
               
chr9:18163515-18163368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 59
               

               
Conread position:
               
511-658
               

               
Cow position:
               
chr9:55288046-55287902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
127, 64
               

               
Conread position:
               
511-662
               

               
Cow position:
               
chr9:48115526-48115671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
512-652
               

               
Cow position:
               
chr9:55529647-55529781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
512-654
               

               
Cow position:
               
chr9:30402585-30402442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
512-657
               

               
Cow position:
               
chr9:18216068-18215924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr9:7101278-7101429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr9:10010656-10010797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr9:11200096-11199950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 76
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr9:28342811-28342664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
512-660
               

               
Cow position:
               
chr9:1712864-1712717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
122, 76
               

               
Conread position:
               
512-660
               

               
Cow position:
               
chr9:41964888-41964746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
512-660
               

               
Cow position:
               
chr9:52998534-52998390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
512-661
               

               
Cow position:
               
chr9:53123930-53124080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
126, 76
               

               
Conread position:
               
513-592
               

               
Cow position:
               
chr9:8735630-8735709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
80
               

               
Alignm identity:
               
72
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
513-658
               

               
Cow position:
               
chr9:29185295-29185150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
517-658
               

               
Cow position:
               
chr9:20637224-20637360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
518-661
               

               
Cow position:
               
chr9:46930310-46930449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
522-630
               

               
Cow position:
               
chr9:10133186-10133078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 66
               

               
Conread position:
               
522-652
               

               
Cow position:
               
chr9:1841426-1841556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
522-658
               

               
Cow position:
               
chr9:55495135-55494999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 72
               

               
Conread position:
               
524-658
               

               
Cow position:
               
chr9:1443765-1443630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
526-658
               

               
Cow position:
               
chr9:5164130-5163998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
531-641
               

               
Cow position:
               
chr9:35360429-35360320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
658-798
               

               
Cow position:
               
chr9:15223855-15223715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
667-798
               

               
Cow position:
               
chr9:23518838-23518706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               
Show alignments to all cow chromosomes.