Cow genome map


           Conread name:
           Tra1-TCH01C090038
        

               Conread position:
               217-470
               

               Cow position:
               chr11:49650853-49650596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               93, 60
               

               Conread position:
               218-481
               

               Cow position:
               chr11:40752547-40752292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               99, 59
               

               Conread position:
               218-569
               

               Cow position:
               chr11:21548555-21548178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               44, 22
               

               Conread position:
               218-631
               

               Cow position:
               chr11:43255359-43255798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 111
               

               Conread position:
               220-612
               

               Cow position:
               chr11:81426552-81426160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               58, 187
               

               Conread position:
               222-407
               

               Cow position:
               chr11:76708600-76708415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               222-427
               

               Cow position:
               chr11:55361641-55361433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-591
               

               Cow position:
               chr11:53641378-53641001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 106
               

               Conread position:
               239-515
               

               Cow position:
               chr11:83074717-83074994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               418-628
               

               Cow position:
               chr11:35097517-35097301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 117
               
Show alignments to all cow chromosomes.