Cow genome map
| Conread name: | Tra1-TCH01C090038 |
| Conread position: | 200-496 |
| Cow position: | chr17:44335290-44335585 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 206-468 |
| Cow position: | chr17:42446410-42446663 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 104, 17 |
| Conread position: | 214-514 |
| Cow position: | chr17:26139376-26139064 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 217-441 |
| Cow position: | chr17:25620689-25620458 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 217-468 |
| Cow position: | chr17:27779949-27779686 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 163 |
| Conread position: | 218-476 |
| Cow position: | chr17:26348588-26348850 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 218-482 |
| Cow position: | chr17:28486108-28485846 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 218-519 |
| Cow position: | chr17:25640822-25641135 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 53, 138 |
| Conread position: | 218-628 |
| Cow position: | chr17:29531038-29531477 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 225 |
| Conread position: | 218-636 |
| Cow position: | chr17:32323304-32323742 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 308 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 220-389 |
| Cow position: | chr17:5251220-5251391 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 120 |
| Conread position: | 221-611 |
| Cow position: | chr17:26805005-26804603 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 56, 211 |
| Conread position: | 222-421 |
| Cow position: | chr17:37681000-37681203 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 222-576 |
| Cow position: | chr17:8074882-8074527 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 145 |
| Conread position: | 223-466 |
| Cow position: | chr17:29530627-29530370 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 227-511 |
| Cow position: | chr17:7281033-7280748 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 228-615 |
| Cow position: | chr17:27531182-27530767 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 266-477 |
| Cow position: | chr17:32507646-32507853 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 277-576 |
| Cow position: | chr17:34803727-34803405 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 200 |
Show alignments to all cow chromosomes.