Cow genome map
| Conread name: | Tra1-TCH01C090038 |
| Conread position: | 1-877 |
| Cow position: | chr9:44937834-44936940 (view UCSC Genome Browser custom track) |
| Alignm length: | 909 |
| Alignm identity: | 714 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 209-591 |
| Cow position: | chr9:12292219-12291809 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 210-395 |
| Cow position: | chr9:40785409-40785601 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 212-494 |
| Cow position: | chr9:10799207-10799502 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 129 |
| Conread position: | 215-615 |
| Cow position: | chr9:35724918-35724492 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 306 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 168, 97 |
| Conread position: | 217-464 |
| Cow position: | chr9:48050538-48050793 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 176 |
| Conread position: | 217-634 |
| Cow position: | chr9:39808280-39807843 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 218-418 |
| Cow position: | chr9:51118769-51118969 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 218-427 |
| Cow position: | chr9:47478546-47478333 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 218-525 |
| Cow position: | chr9:17907330-17907645 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 113 |
| Conread position: | 218-576 |
| Cow position: | chr9:13209647-13210020 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 93, 157 |
| Conread position: | 218-638 |
| Cow position: | chr9:40274253-40273802 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 339 |
| Conread position: | 224-580 |
| Cow position: | chr9:53110872-53110501 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 228-422 |
| Cow position: | chr9:31209985-31210177 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 268-576 |
| Cow position: | chr9:23357351-23357027 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 221 |
| Conread position: | 270-607 |
| Cow position: | chr9:6932863-6932532 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 423-628 |
| Cow position: | chr9:20493583-20493366 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 424-576 |
| Cow position: | chr9:51676818-51676664 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 32 |
Show alignments to all cow chromosomes.