Cow genome map

Conread name: Tra1-TCH01C100019

Conread position: 1-120
Cow position: chr13:18054707-18054580 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 20

Conread position: 1-125
Cow position: chr13:706384-706252 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-134
Cow position: chr13:27417175-27417319 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-148
Cow position: chr13:14551680-14551838 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 20

Conread position: 1-149
Cow position: chr13:11486487-11486328 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 20

Conread position: 1-149
Cow position: chr13:54237862-54238021 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-166
Cow position: chr13:32659184-32659354 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 1-167
Cow position: chr13:3419465-3419642 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-173
Cow position: chr13:27835797-27835627 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 104, 74

Conread position: 1-173
Cow position: chr13:32550195-32550015 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 164

Conread position: 1-175
Cow position: chr13:645375-645191 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-176
Cow position: chr13:60508591-60508405 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 1-178
Cow position: chr13:46524925-46524736 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 1-179
Cow position: chr13:3650855-3651043 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 32

Conread position: 1-179
Cow position: chr13:36346540-36346729 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 1-180
Cow position: chr13:42215668-42215854 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 111

Conread position: 1-181
Cow position: chr13:11822498-11822688 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 156

Conread position: 1-181
Cow position: chr13:28131954-28131766 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 1-182
Cow position: chr13:30431583-30431392 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 1-182
Cow position: chr13:43594281-43594088 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 181

Conread position: 1-183
Cow position: chr13:60967330-60967520 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 157

Conread position: 1-184
Cow position: chr13:34052077-34051882 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 45, 181

Conread position: 1-185
Cow position: chr13:3430190-3429995 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 16, 20

Conread position: 1-185
Cow position: chr13:13776412-13776217 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position: chr13:15538535-15538730 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 20

Conread position: 1-185
Cow position: chr13:16808033-16807845 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 145

Conread position: 1-185
Cow position: chr13:21836846-21837041 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position: chr13:25848841-25848646 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position: chr13:28130575-28130767 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 16, 20

Conread position: 1-185
Cow position: chr13:32081327-32081132 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position: chr13:53052287-53052092 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position: chr13:56692721-56692526 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 16, 20

Conread position: 1-187
Cow position: chr13:6343333-6343136 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 1-187
Cow position: chr13:8172948-8173144 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 179

Conread position: 1-187
Cow position: chr13:12616294-12616480 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 107, 136

Conread position: 1-187
Cow position: chr13:15446586-15446782 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 147

Conread position: 1-187
Cow position: chr13:20538120-20538311 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 158

Conread position: 1-187
Cow position: chr13:32754700-32754504 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-187
Cow position: chr13:32980787-32980981 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 51, 157

Conread position: 1-187
Cow position: chr13:35540852-35540655 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 1-191
Cow position: chr13:46182311-46182516 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 1-196
Cow position: chr13:22906822-22907026 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 52, 121

Conread position: 1-200
Cow position: chr13:6553020-6553224 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 105

Conread position: 1-201
Cow position: chr13:4487304-4487090 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 1-201
Cow position: chr13:5498354-5498564 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 1-201
Cow position: chr13:7465646-7465855 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 154

Conread position: 1-201
Cow position: chr13:9049050-9048838 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 51, 110

Conread position: 1-201
Cow position: chr13:30468667-30468881 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 1-201
Cow position: chr13:30504996-30505203 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 141

Conread position: 1-201
Cow position: chr13:31607987-31608200 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 163

Conread position: 1-201
Cow position: chr13:31990319-31990108 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 1-201
Cow position: chr13:32733740-32733950 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 111

Conread position: 1-201
Cow position: chr13:33332914-33333128 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 0

Conread position: 1-201
Cow position: chr13:34345753-34345539 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 1-201
Cow position: chr13:39911847-39911635 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 1-201
Cow position: chr13:42086682-42086893 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 111

Conread position: 1-201
Cow position: chr13:43974507-43974717 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 52, 111

Conread position: 1-202
Cow position: chr13:6078905-6078690 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 1-202
Cow position: chr13:10928463-10928251 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-202
Cow position: chr13:26098682-26098896 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 1-202
Cow position: chr13:38013215-38013425 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 71

Conread position: 1-202
Cow position: chr13:44323518-44323729 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 52, 179

Conread position: 1-203
Cow position: chr13:19262317-19262526 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 184

Conread position: 1-208
Cow position: chr13:20683586-20683370 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 38

Conread position: 1-209
Cow position: chr13:16270511-16270734 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 1-217
Cow position: chr13:50079116-50079341 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 212

Conread position: 1-218
Cow position: chr13:14302536-14302766 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 216

Conread position: 1-218
Cow position: chr13:15280739-15280507 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 218

Conread position: 1-220
Cow position: chr13:13313040-13312811 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 187

Conread position: 1-220
Cow position: chr13:14399624-14399857 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 1-220
Cow position: chr13:21135183-21134949 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-220
Cow position: chr13:30306865-30306633 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 52, 215

Conread position: 1-220
Cow position: chr13:33162399-33162159 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 52, 224

Conread position: 1-220
Cow position: chr13:41807290-41807521 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 173

Conread position: 1-221
Cow position: chr13:2800335-2800102 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 216

Conread position: 1-221
Cow position: chr13:6664677-6664910 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 52, 216

Conread position: 1-221
Cow position: chr13:15921009-15921242 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 216

Conread position: 1-221
Cow position: chr13:18329674-18329907 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 216

Conread position: 1-221
Cow position: chr13:32921862-32922095 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 216

Conread position: 1-221
Cow position: chr13:33466871-33466638 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 216

Conread position: 1-240
Cow position: chr13:58211195-58211449 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 52, 235

Conread position: 2-135
Cow position: chr13:23196326-23196182 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 2-139
Cow position: chr13:45494229-45494373 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 99

Conread position: 2-149
Cow position: chr13:50440378-50440536 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 2-171
Cow position: chr13:25320333-25320513 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 2-185
Cow position: chr13:3556861-3556667 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr13:4615456-4615266 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr13:6869753-6869563 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 51, 144

Conread position: 2-185
Cow position: chr13:7402855-7402660 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr13:11390708-11390514 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr13:14590063-14590257 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr13:20472809-20473003 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr13:26204009-26204203 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr13:29054978-29055172 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr13:33522506-33522700 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 2-185
Cow position: chr13:40300297-40300491 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr13:46056392-46056198 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 20

Conread position: 2-185
Cow position: chr13:47023249-47023443 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr13:51298038-51298232 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr13:53156939-53157133 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr13:55573809-55574003 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr13:58313782-58313588 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 3-220
Cow position: chr13:19638887-19638657 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 50, 214

Conread position: 6-220
Cow position: chr13:4664063-4663839 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.