Cow genome map


           Conread name:
           Tra1-TCH01C100019
        

               Conread position:
               1-120
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-125
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-134
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               104, 74
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               48, 164
               

               Conread position:
               1-175
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 156
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-182
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-182
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 181
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 157
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               45, 181
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 145
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 179
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               107, 136
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 147
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 158
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               51, 157
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 105
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 154
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               51, 110
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               52, 141
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               52, 163
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               52, 179
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 184
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 38
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               52, 212
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 218
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 187
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               52, 215
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               52, 224
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               45, 216
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               52, 235
               

               Conread position:
               2-135
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-139
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-171
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               50, 214
               

               Conread position:
               6-220
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 0
               
Show alignments to all cow chromosomes.