Cow genome map


           Conread name:
           Tra1-TCH01C100019
        

               Conread position:
               1-125
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-133
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               1-142
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-161
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               52, 155
               

               Conread position:
               1-170
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               52, 139
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 109
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 128
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 185
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 182
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 150
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 172
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               52, 146
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               50, 150
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               52, 159
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               52, 41
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               52, 222
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 103
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               51, 215
               

               Conread position:
               2-121
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-126
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-138
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-150
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-161
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-170
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 173
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-187
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               103, 50
               

               Conread position:
               2-220
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-220
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               2-220
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               51, 184
               

               Conread position:
               3-144
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-183
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-185
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-185
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-221
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               50, 121
               

               Conread position:
               5-187
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 115
               
Show alignments to all cow chromosomes.