Cow genome map


           Conread name:
           Tra1-TCH01C100019
        

               Conread position:
               1-114
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-121
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-121
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-124
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-125
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-161
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 87
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 132
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 158
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               52, 146
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 151
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 144
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 130
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               51, 159
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               52, 174
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 180
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 182
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 174
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 192
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               52, 188
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 176
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 174
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 174
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 165
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               52, 213
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               52, 187
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               52, 151
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               2-144
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-201
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               51, 186
               

               Conread position:
               2-204
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 171
               

               Conread position:
               3-221
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               3-221
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 185
               

               Conread position:
               4-218
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 25
               
Show alignments to all cow chromosomes.