Cow genome map

Conread name: Tra1-TCH01C100019

Conread position: 1-116
Cow position: chr24:27290298-27290175 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-130
Cow position: chr24:29375760-29375622 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-143
Cow position: chr24:24818843-24818996 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-150
Cow position: chr24:40382086-40382246 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 20

Conread position: 1-161
Cow position: chr24:17455799-17455628 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 1-178
Cow position: chr24:16646193-16646375 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 175

Conread position: 1-181
Cow position: chr24:33639746-33639937 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 1-181
Cow position: chr24:40300588-40300396 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-183
Cow position: chr24:15674869-15675060 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 102

Conread position: 1-185
Cow position: chr24:5929530-5929336 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 51, 173

Conread position: 1-185
Cow position: chr24:10035292-10035487 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 16, 20

Conread position: 1-185
Cow position: chr24:11081031-11081223 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position: chr24:11207855-11208050 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 16, 20

Conread position: 1-185
Cow position: chr24:12447243-12447051 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position: chr24:20604500-20604306 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position: chr24:27345144-27345339 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 16, 20

Conread position: 1-187
Cow position: chr24:3794234-3794037 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 1-187
Cow position: chr24:6067595-6067789 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 114

Conread position: 1-187
Cow position: chr24:14378749-14378946 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 1-187
Cow position: chr24:35067043-35067240 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 1-188
Cow position: chr24:27905859-27905660 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 1-200
Cow position: chr24:23052135-23052345 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 1-200
Cow position: chr24:40036202-40036415 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 44, 73

Conread position: 1-201
Cow position: chr24:12293444-12293230 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 1-201
Cow position: chr24:17720668-17720882 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 1-201
Cow position: chr24:26412798-26412585 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 52, 179

Conread position: 1-201
Cow position: chr24:29083913-29084126 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 100

Conread position: 1-201
Cow position: chr24:36027763-36027977 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 1-201
Cow position: chr24:39067116-39067330 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 1-202
Cow position: chr24:12090727-12090517 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 52, 120

Conread position: 1-202
Cow position: chr24:18113207-18112992 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 1-202
Cow position: chr24:25110997-25110785 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 1-202
Cow position: chr24:31770230-31770011 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 1-220
Cow position: chr24:11839606-11839373 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 1-220
Cow position: chr24:12331955-12332188 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 1-221
Cow position: chr24:144602-144835 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 52, 216

Conread position: 1-221
Cow position: chr24:6035428-6035662 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 217

Conread position: 1-221
Cow position: chr24:6413230-6412997 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 216

Conread position: 1-221
Cow position: chr24:8608080-8607848 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 215

Conread position: 1-221
Cow position: chr24:9550010-9549781 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 52, 80

Conread position: 1-221
Cow position: chr24:11940513-11940280 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 52, 215

Conread position: 1-221
Cow position: chr24:13304748-13304979 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 32

Conread position: 1-221
Cow position: chr24:17544209-17544425 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 114

Conread position: 1-221
Cow position: chr24:17752500-17752727 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 210

Conread position: 1-221
Cow position: chr24:20283460-20283693 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 216

Conread position: 1-221
Cow position: chr24:22975561-22975326 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 218

Conread position: 1-221
Cow position: chr24:32853961-32853731 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 213

Conread position: 2-122
Cow position: chr24:40789844-40789972 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 2-125
Cow position: chr24:43906609-43906478 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 2-132
Cow position: chr24:11311774-11311912 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 2-138
Cow position: chr24:16475294-16475147 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 19

Conread position: 2-178
Cow position: chr24:2118621-2118434 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 19

Conread position: 2-184
Cow position: chr24:8754266-8754073 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr24:3851346-3851152 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr24:6020328-6020522 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr24:7596812-7597006 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr24:9044946-9045140 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr24:11215637-11215831 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr24:12377365-12377559 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr24:14249832-14250027 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr24:15084330-15084136 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr24:17188522-17188717 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 2-185
Cow position: chr24:18740618-18740812 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 19

Conread position: 2-185
Cow position: chr24:40272593-40272400 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 173

Conread position: 2-185
Cow position: chr24:40427943-40428137 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 2-186
Cow position: chr24:2731122-2731314 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 2-187
Cow position: chr24:6443187-6442992 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 162

Conread position: 2-201
Cow position: chr24:31370542-31370750 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 126

Conread position: 2-221
Cow position: chr24:18222743-18222960 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 106, 51

Conread position: 3-181
Cow position: chr24:25372852-25372663 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 3-220
Cow position: chr24:40518863-40519094 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 4-202
Cow position: chr24:6149025-6148812 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 5-185
Cow position: chr24:31067304-31067488 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 47, 76

Conread position: 5-221
Cow position: chr24:40466665-40466894 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 48, 212

Show alignments to all cow chromosomes.