Cow genome map


           Conread name:
           Tra1-TCH01C100019
        

               Conread position:
               1-121
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 55
               

               Conread position:
               1-121
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-125
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-132
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-134
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               52, 129
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-182
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               52, 104
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               52, 122
               

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 177
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 186
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               52, 43
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               52, 145
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 102
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 174
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               49, 162
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               49, 164
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 173
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 162
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 41
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               52, 187
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 213
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               52, 163
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               45, 221
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               44, 173
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               52, 217
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 100
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 216
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 214
               

               Conread position:
               2-152
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               2-181
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-194
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 178
               

               Conread position:
               2-201
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               2-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 198
               

               Conread position:
               3-167
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-181
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-219
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               5-202
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               48, 154
               

               Conread position:
               5-221
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               48, 211
               
Show alignments to all cow chromosomes.