Cow genome map
| Conread name: | Tra1-TCH01C100019 |
| Conread position: | 1-110 |
| Cow position: | chr5:24837568-24837684 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-120 |
| Cow position: | chr5:10299843-10299716 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-122 |
| Cow position: | chr5:44848543-44848672 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-123 |
| Cow position: | chr5:21616938-21616811 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-135 |
| Cow position: | chr5:35543155-35543010 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-146 |
| Cow position: | chr5:7066727-7066883 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-150 |
| Cow position: | chr5:9412426-9412586 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-151 |
| Cow position: | chr5:56467177-56467017 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 1-177 |
| Cow position: | chr5:4071343-4071156 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-177 |
| Cow position: | chr5:37377351-37377165 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-178 |
| Cow position: | chr5:21828327-21828138 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-181 |
| Cow position: | chr5:18491908-18491717 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 180 |
| Conread position: | 1-182 |
| Cow position: | chr5:13718664-13718856 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-183 |
| Cow position: | chr5:59642-59834 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-183 |
| Cow position: | chr5:60447506-60447317 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 149 |
| Conread position: | 1-183 |
| Cow position: | chr5:62159426-62159619 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-184 |
| Cow position: | chr5:11631489-11631683 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-184 |
| Cow position: | chr5:35207732-35207538 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-184 |
| Cow position: | chr5:55088363-55088169 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:407937-407742 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-185 |
| Cow position: | chr5:1640379-1640574 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:3971018-3970823 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:5814604-5814799 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-185 |
| Cow position: | chr5:6124667-6124862 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:10479148-10479345 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:10839980-10840167 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 1-185 |
| Cow position: | chr5:18118479-18118674 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:23565759-23565564 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-185 |
| Cow position: | chr5:26053227-26053032 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-185 |
| Cow position: | chr5:28013353-28013158 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-185 |
| Cow position: | chr5:29633488-29633683 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:29634925-29634730 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-185 |
| Cow position: | chr5:31709787-31709601 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 116 |
| Conread position: | 1-185 |
| Cow position: | chr5:38075361-38075556 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:38883193-38883387 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-185 |
| Cow position: | chr5:46667567-46667375 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:47871575-47871773 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:48026764-48026569 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:51165813-51166009 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:52239771-52239966 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-185 |
| Cow position: | chr5:58900548-58900743 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:68273353-68273548 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 1-186 |
| Cow position: | chr5:15760880-15761068 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 1-187 |
| Cow position: | chr5:25913214-25913017 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-187 |
| Cow position: | chr5:27906972-27907169 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-187 |
| Cow position: | chr5:36409944-36410141 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-187 |
| Cow position: | chr5:45999552-45999760 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-187 |
| Cow position: | chr5:51309439-51309242 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-187 |
| Cow position: | chr5:51746714-51746517 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-187 |
| Cow position: | chr5:53005763-53005959 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 158 |
| Conread position: | 1-187 |
| Cow position: | chr5:75754628-75754825 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-196 |
| Cow position: | chr5:57625864-57625663 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 1-196 |
| Cow position: | chr5:69337266-69337061 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 187 |
| Conread position: | 1-199 |
| Cow position: | chr5:29969104-29968892 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:279684-279898 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:411223-411437 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:2977283-2977067 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:4015376-4015590 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:5685784-5685995 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:6060136-6060349 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 1-201 |
| Cow position: | chr5:10853338-10853552 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:12134089-12133875 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:13807266-13807476 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 1-201 |
| Cow position: | chr5:18250543-18250329 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:24087554-24087768 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:24299509-24299295 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:41547526-41547737 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:44276091-44275877 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:47560064-47560278 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 52, 175 |
| Conread position: | 1-201 |
| Cow position: | chr5:55723025-55722811 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:57986988-57986777 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 89 |
| Conread position: | 1-201 |
| Cow position: | chr5:58322237-58322450 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 52, 173 |
| Conread position: | 1-201 |
| Cow position: | chr5:64061823-64061609 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-201 |
| Cow position: | chr5:66338341-66338133 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 1-201 |
| Cow position: | chr5:70593507-70593720 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-202 |
| Cow position: | chr5:4962891-4963105 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-202 |
| Cow position: | chr5:30276175-30275965 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 86 |
| Conread position: | 1-202 |
| Cow position: | chr5:40928530-40928745 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 111 |
| Conread position: | 1-202 |
| Cow position: | chr5:41951573-41951785 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 1-202 |
| Cow position: | chr5:44752827-44753045 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-202 |
| Cow position: | chr5:48804974-48805189 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-203 |
| Cow position: | chr5:27046404-27046188 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-217 |
| Cow position: | chr5:39936598-39936366 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 220 |
| Conread position: | 1-218 |
| Cow position: | chr5:46677106-46676879 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 1-220 |
| Cow position: | chr5:7175794-7175561 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 1-220 |
| Cow position: | chr5:31145302-31145531 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 52, 187 |
| Conread position: | 1-220 |
| Cow position: | chr5:32088284-32088516 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-220 |
| Cow position: | chr5:35762775-35762553 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 51, 175 |
| Conread position: | 1-220 |
| Cow position: | chr5:42667920-42668160 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 143 |
| Conread position: | 1-220 |
| Cow position: | chr5:42744281-42744053 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 48, 148 |
| Conread position: | 1-220 |
| Cow position: | chr5:53185008-53185240 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-220 |
| Cow position: | chr5:66257119-66256895 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 177 |
| Conread position: | 1-221 |
| Cow position: | chr5:1338428-1338658 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 52, 213 |
| Conread position: | 1-221 |
| Cow position: | chr5:2917951-2917724 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 52, 86 |
| Conread position: | 1-221 |
| Cow position: | chr5:3500636-3500865 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 212 |
| Conread position: | 1-221 |
| Cow position: | chr5:3544791-3544559 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 52, 215 |
| Conread position: | 1-221 |
| Cow position: | chr5:6151336-6151569 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 216 |
| Conread position: | 1-221 |
| Cow position: | chr5:7498489-7498722 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 216 |
| Conread position: | 1-221 |
| Cow position: | chr5:10922341-10922108 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 51, 216 |
| Conread position: | 1-221 |
| Cow position: | chr5:18557922-18558154 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 52, 188 |
| Conread position: | 1-221 |
| Cow position: | chr5:19470760-19470994 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-221 |
| Cow position: | chr5:19978417-19978651 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 51, 181 |
| Conread position: | 1-221 |
| Cow position: | chr5:21189713-21189481 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 108 |
| Conread position: | 1-221 |
| Cow position: | chr5:29742062-29742298 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 219 |
| Conread position: | 1-221 |
| Cow position: | chr5:30582821-30582589 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 163 |
| Conread position: | 1-221 |
| Cow position: | chr5:36724244-36724465 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 52, 116 |
| Conread position: | 1-221 |
| Cow position: | chr5:43984579-43984347 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 215 |
| Conread position: | 1-221 |
| Cow position: | chr5:44708876-44709109 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 216 |
| Conread position: | 1-221 |
| Cow position: | chr5:47343370-47343136 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 51, 217 |
| Conread position: | 1-221 |
| Cow position: | chr5:49522197-49521966 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 43, 214 |
| Conread position: | 1-221 |
| Cow position: | chr5:54337395-54337165 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 52, 213 |
| Conread position: | 1-221 |
| Cow position: | chr5:55631560-55631327 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 216 |
| Conread position: | 1-221 |
| Cow position: | chr5:58245827-58245595 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 215 |
| Conread position: | 1-221 |
| Cow position: | chr5:73485392-73485623 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 214 |
| Conread position: | 2-116 |
| Cow position: | chr5:38058281-38058403 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-126 |
| Cow position: | chr5:37431021-37431153 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-126 |
| Cow position: | chr5:37432329-37432461 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-134 |
| Cow position: | chr5:46845578-46845721 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-135 |
| Cow position: | chr5:40864093-40864237 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-154 |
| Cow position: | chr5:29223525-29223362 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-165 |
| Cow position: | chr5:37782640-37782815 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-181 |
| Cow position: | chr5:351363-351553 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-181 |
| Cow position: | chr5:36369497-36369687 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-181 |
| Cow position: | chr5:37609514-37609704 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-181 |
| Cow position: | chr5:37626341-37626151 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-184 |
| Cow position: | chr5:43350289-43350096 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:442814-443008 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:1059072-1059266 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:1383468-1383274 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:1394965-1395161 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:2394819-2395007 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:4041632-4041438 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-185 |
| Cow position: | chr5:4683006-4683200 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:6455168-6455362 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:6773060-6772866 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:10260930-10261123 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 2-185 |
| Cow position: | chr5:10417853-10418045 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:10772335-10772529 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:11834967-11835161 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-185 |
| Cow position: | chr5:11986689-11986879 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 144 |
| Conread position: | 2-185 |
| Cow position: | chr5:12325094-12325288 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-185 |
| Cow position: | chr5:20107537-20107729 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-185 |
| Cow position: | chr5:23881836-23882029 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:24633569-24633375 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:40864334-40864528 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-185 |
| Cow position: | chr5:41586769-41586575 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:48374158-48373964 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-185 |
| Cow position: | chr5:54951622-54951821 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:56931396-56931590 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:59064938-59064744 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:59518521-59518715 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-187 |
| Cow position: | chr5:5924488-5924678 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 110 |
| Conread position: | 2-187 |
| Cow position: | chr5:29255719-29255915 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-187 |
| Cow position: | chr5:50981860-50981664 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 2-190 |
| Cow position: | chr5:53075375-53075573 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 2-201 |
| Cow position: | chr5:64778511-64778719 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 2-201 |
| Cow position: | chr5:76098536-76098748 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 2-202 |
| Cow position: | chr5:32964565-32964779 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 102 |
| Conread position: | 2-220 |
| Cow position: | chr5:41548064-41548287 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 3-201 |
| Cow position: | chr5:15677550-15677341 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-221 |
| Cow position: | chr5:14636085-14636316 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 50, 214 |
| Conread position: | 4-178 |
| Cow position: | chr5:10255048-10254866 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 4-185 |
| Cow position: | chr5:54360628-54360820 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.