Cow genome map


           Conread name:
           Tra1-TCH01C100049
        

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 83
               

               Conread position:
               2-397
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 85
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 154
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 249
               

               Conread position:
               4-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               193, 43
               

               Conread position:
               4-388
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               4-391
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               69, 109
               

               Conread position:
               4-391
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 140
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 258
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 160
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               4-398
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 115
               

               Conread position:
               12-388
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               13-388
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 347
               

               Conread position:
               19-394
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 213
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 13
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 33
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 265
               

               Conread position:
               20-396
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 138
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 12
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 279
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 262
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 35
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 35
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               47-397
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               38, 98
               

               Conread position:
               47-398
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 149
               

               Conread position:
               51-313
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 221
               

               Conread position:
               106-394
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 108
               

               Conread position:
               147-404
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               159-398
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               38, 164
               

               Conread position:
               167-398
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               179-394
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               191-394
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               195-398
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               619-859
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               630-863
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               631-858
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               631-863
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               631-863
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 123
               

               Conread position:
               631-863
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               632-863
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               641-849
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               641-859
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-859
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 204
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               14, 138
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               14, 105
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               642-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 201
               

               Conread position:
               646-863
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               648-856
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               651-863
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               654-859
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               654-863
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               657-863
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               672-863
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               679-863
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               683-863
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               30, 149
               

               Conread position:
               688-863
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               704-859
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               725-863
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               737-863
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               740-863
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               116, 0
               
Show alignments to all cow chromosomes.