Cow genome map

Conread name: Tra1-TCH01C100049

Conread position: 2-264
Cow position: chr13:15450269-15449990 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 48, 11

Conread position: 2-394
Cow position: chr13:11794192-11793814 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 26

Conread position: 2-394
Cow position: chr13:48358494-48358898 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 280

Conread position: 2-398
Cow position: chr13:43590180-43590596 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 270

Conread position: 3-391
Cow position: chr13:34030472-34030871 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 44, 95

Conread position: 4-394
Cow position: chr13:4484647-4485062 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 122

Conread position: 4-394
Cow position: chr13:34041484-34041064 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 4-398
Cow position: chr13:9045622-9046031 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 281

Conread position: 5-391
Cow position: chr13:31555890-31555492 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 272
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 43, 175

Conread position: 7-398
Cow position: chr13:34938318-34938715 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 14-394
Cow position: chr13:31730033-31729622 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 20-393
Cow position: chr13:13900736-13901136 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 58-398
Cow position: chr13:31507829-31508184 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 60

Conread position: 73-398
Cow position: chr13:26845215-26845527 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 172, 116

Conread position: 74-394
Cow position: chr13:32924194-32923866 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 80

Conread position: 103-394
Cow position: chr13:33335337-33335045 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 215

Conread position: 159-398
Cow position: chr13:42090670-42090416 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 212

Conread position: 619-863
Cow position: chr13:11793849-11793596 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 624-857
Cow position: chr13:20541016-20540779 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 631-863
Cow position: chr13:5500750-5500517 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 26

Conread position: 641-849
Cow position: chr13:50110710-50110920 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 641-859
Cow position: chr13:11797450-11797230 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 641-859
Cow position: chr13:47575349-47575569 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 641-863
Cow position: chr13:679008-679230 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 162

Conread position: 641-863
Cow position: chr13:6358381-6358606 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 641-863
Cow position: chr13:21697521-21697746 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 643-851
Cow position: chr13:34324318-34324109 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 647-863
Cow position: chr13:42090429-42090211 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 648-863
Cow position: chr13:31508172-31508389 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 649-863
Cow position: chr13:34938704-34938920 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 118

Conread position: 659-863
Cow position: chr13:33524680-33524474 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 659-863
Cow position: chr13:34869248-34869454 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 0

Conread position: 688-859
Cow position: chr13:36348831-36348659 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 693-859
Cow position: chr13:5624436-5624270 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 12

Conread position: 724-863
Cow position: chr13:34050050-34050188 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 136, 71

Conread position: 733-863
Cow position: chr13:26845578-26845701 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 126, 7

Conread position: 755-859
Cow position: chr13:30239720-30239824 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 755-863
Cow position: chr13:15543974-15544084 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 0

Show alignments to all cow chromosomes.