Cow genome map
Conread name: | Tra1-TCH01C100049 |
Conread position: | 2-264 |
Cow position: | chr13:15450269-15449990 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 206 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 48, 11 |
Conread position: | 2-394 |
Cow position: | chr13:11794192-11793814 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 26 |
Conread position: | 2-394 |
Cow position: | chr13:48358494-48358898 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 280 |
Conread position: | 2-398 |
Cow position: | chr13:43590180-43590596 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 270 |
Conread position: | 3-391 |
Cow position: | chr13:34030472-34030871 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 284 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 44, 95 |
Conread position: | 4-394 |
Cow position: | chr13:4484647-4485062 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 122 |
Conread position: | 4-394 |
Cow position: | chr13:34041484-34041064 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 18 |
Conread position: | 4-398 |
Cow position: | chr13:9045622-9046031 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 281 |
Conread position: | 5-391 |
Cow position: | chr13:31555890-31555492 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 272 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 43, 175 |
Conread position: | 7-398 |
Cow position: | chr13:34938318-34938715 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 25 |
Conread position: | 14-394 |
Cow position: | chr13:31730033-31729622 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 20-393 |
Cow position: | chr13:13900736-13901136 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 58-398 |
Cow position: | chr13:31507829-31508184 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 60 |
Conread position: | 73-398 |
Cow position: | chr13:26845215-26845527 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 223 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 172, 116 |
Conread position: | 74-394 |
Cow position: | chr13:32924194-32923866 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 80 |
Conread position: | 103-394 |
Cow position: | chr13:33335337-33335045 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 215 |
Conread position: | 159-398 |
Cow position: | chr13:42090670-42090416 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 212 |
Conread position: | 619-863 |
Cow position: | chr13:11793849-11793596 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 624-857 |
Cow position: | chr13:20541016-20540779 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 631-863 |
Cow position: | chr13:5500750-5500517 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 26 |
Conread position: | 641-849 |
Cow position: | chr13:50110710-50110920 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 641-859 |
Cow position: | chr13:11797450-11797230 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 641-859 |
Cow position: | chr13:47575349-47575569 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 641-863 |
Cow position: | chr13:679008-679230 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 162 |
Conread position: | 641-863 |
Cow position: | chr13:6358381-6358606 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 641-863 |
Cow position: | chr13:21697521-21697746 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 643-851 |
Cow position: | chr13:34324318-34324109 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 647-863 |
Cow position: | chr13:42090429-42090211 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 168 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 648-863 |
Cow position: | chr13:31508172-31508389 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 649-863 |
Cow position: | chr13:34938704-34938920 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 118 |
Conread position: | 659-863 |
Cow position: | chr13:33524680-33524474 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 659-863 |
Cow position: | chr13:34869248-34869454 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 163 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 688-859 |
Cow position: | chr13:36348831-36348659 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 136 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 693-859 |
Cow position: | chr13:5624436-5624270 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 133 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 21, 12 |
Conread position: | 724-863 |
Cow position: | chr13:34050050-34050188 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 105 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 136, 71 |
Conread position: | 733-863 |
Cow position: | chr13:26845578-26845701 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 108 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 126, 7 |
Conread position: | 755-859 |
Cow position: | chr13:30239720-30239824 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 87 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 755-863 |
Cow position: | chr13:15543974-15544084 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 91 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.