Cow genome map
| Conread name: | Tra1-TCH01C100049 |
| Conread position: | 2-394 |
| Cow position: | chr14:45710998-45710583 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 2-396 |
| Cow position: | chr14:12611160-12611559 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 2-398 |
| Cow position: | chr14:24996848-24996449 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 35 |
| Conread position: | 2-399 |
| Cow position: | chr14:48826012-48826428 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 29 |
| Conread position: | 3-359 |
| Cow position: | chr14:30735895-30736278 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 117 |
| Conread position: | 4-390 |
| Cow position: | chr14:17760155-17759751 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 248 |
| Conread position: | 4-394 |
| Cow position: | chr14:22030718-22030304 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 4-394 |
| Cow position: | chr14:46391804-46391395 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 182 |
| Conread position: | 4-394 |
| Cow position: | chr14:48253585-48253172 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 310 |
| Conread position: | 4-395 |
| Cow position: | chr14:16918991-16918569 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 4-398 |
| Cow position: | chr14:40341780-40342209 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 140 |
| Conread position: | 5-394 |
| Cow position: | chr14:30595641-30595207 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 19-394 |
| Cow position: | chr14:48601587-48601204 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 20-398 |
| Cow position: | chr14:46466427-46466813 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 40-394 |
| Cow position: | chr14:13779715-13780097 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 47-394 |
| Cow position: | chr14:48402372-48402020 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 228 |
| Conread position: | 74-391 |
| Cow position: | chr14:32043942-32044271 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 252 |
| Conread position: | 74-394 |
| Cow position: | chr14:15275045-15274693 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 75-397 |
| Cow position: | chr14:37455107-37454796 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 118 |
| Conread position: | 629-863 |
| Cow position: | chr14:27978478-27978713 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 28 |
| Conread position: | 630-863 |
| Cow position: | chr14:43559357-43559595 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 77 |
| Conread position: | 631-859 |
| Cow position: | chr14:23256237-23256009 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 631-859 |
| Cow position: | chr14:44552960-44553187 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 15, 163 |
| Conread position: | 631-863 |
| Cow position: | chr14:16342779-16342544 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 632-859 |
| Cow position: | chr14:45710604-45710387 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 633-863 |
| Cow position: | chr14:751691-751922 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 639-863 |
| Cow position: | chr14:48826403-48826632 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 659-863 |
| Cow position: | chr14:16808171-16807965 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 712-863 |
| Cow position: | chr14:29774918-29774765 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 725-863 |
| Cow position: | chr14:13462675-13462813 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 131, 96 |
| Conread position: | 737-859 |
| Cow position: | chr14:46502932-46503053 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.