Cow genome map
Conread name: | Tra1-TCH01C100049 |
Conread position: | 2-390 |
Cow position: | chr17:19020528-19020937 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 291 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 42, 283 |
Conread position: | 2-393 |
Cow position: | chr17:54493-54097 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 294 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 37, 225 |
Conread position: | 2-398 |
Cow position: | chr17:15372183-15372594 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 115 |
Conread position: | 2-398 |
Cow position: | chr17:20086798-20086391 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 31 |
Conread position: | 4-390 |
Cow position: | chr17:4061054-4061475 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 340 |
Conread position: | 4-391 |
Cow position: | chr17:239303-239675 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 49 |
Conread position: | 4-391 |
Cow position: | chr17:19267871-19267463 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 285 |
Conread position: | 4-394 |
Cow position: | chr17:6069511-6069918 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 4-394 |
Cow position: | chr17:11086763-11086352 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 64 |
Conread position: | 4-399 |
Cow position: | chr17:2174767-2175177 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 280 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 47, 30 |
Conread position: | 5-391 |
Cow position: | chr17:20403389-20403792 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 123 |
Conread position: | 5-397 |
Cow position: | chr17:16121585-16121202 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 48 |
Conread position: | 20-389 |
Cow position: | chr17:4168160-4168542 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 245 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 30, 296 |
Conread position: | 35-394 |
Cow position: | chr17:24029007-24028629 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 306 |
Conread position: | 35-394 |
Cow position: | chr17:40805806-40806182 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 35 |
Conread position: | 51-394 |
Cow position: | chr17:27793767-27793406 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 59 |
Conread position: | 77-397 |
Cow position: | chr17:23038618-23038945 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 245 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 116, 22 |
Conread position: | 161-391 |
Cow position: | chr17:3640775-3640533 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 199-394 |
Cow position: | chr17:733174-732967 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 166 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 627-860 |
Cow position: | chr17:22133615-22133849 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 85, 19 |
Conread position: | 630-846 |
Cow position: | chr17:1704225-1704440 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 165 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 84, 16 |
Conread position: | 631-863 |
Cow position: | chr17:135982-136215 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 171 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 27, 67 |
Conread position: | 638-863 |
Cow position: | chr17:2077635-2077405 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 168 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 639-863 |
Cow position: | chr17:34157482-34157709 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 641-863 |
Cow position: | chr17:182935-183158 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 168 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 14, 134 |
Conread position: | 641-863 |
Cow position: | chr17:2263501-2263726 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 641-863 |
Cow position: | chr17:4061466-4061688 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 152 |
Conread position: | 641-863 |
Cow position: | chr17:5227985-5228209 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 169 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 19, 118 |
Conread position: | 641-863 |
Cow position: | chr17:23323086-23322861 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 641-863 |
Cow position: | chr17:27793419-27793197 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 19 |
Conread position: | 648-859 |
Cow position: | chr17:15372582-15372794 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 659-863 |
Cow position: | chr17:39049596-39049802 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 705-863 |
Cow position: | chr17:4346152-4345992 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 134 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 705-863 |
Cow position: | chr17:19980709-19980549 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 129 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 743-863 |
Cow position: | chr17:33284222-33284105 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 116, 16 |
Show alignments to all cow chromosomes.