Cow genome map


           Conread name:
           Tra1-TCH01C100049
        

               Conread position:
               2-390
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               42, 283
               

               Conread position:
               2-393
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               294
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 31
               

               Conread position:
               4-390
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 340
               

               Conread position:
               4-391
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 49
               

               Conread position:
               4-391
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 285
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               4-399
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               280
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               5-391
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 123
               

               Conread position:
               5-397
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 48
               

               Conread position:
               20-389
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               30, 296
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 306
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 35
               

               Conread position:
               51-394
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 59
               

               Conread position:
               77-397
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               116, 22
               

               Conread position:
               161-391
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               199-394
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               627-860
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               630-846
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               631-863
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               638-863
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               639-863
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 134
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               19, 118
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               648-859
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               659-863
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               705-863
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               134
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               705-863
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               743-863
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 16
               
Show alignments to all cow chromosomes.