Cow genome map
| Conread name: | Tra1-TCH01C100049 |
| Conread position: | 1-371 |
| Cow position: | chr18:37663509-37663878 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 49, 157 |
| Conread position: | 2-389 |
| Cow position: | chr18:19405406-19405006 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 144 |
| Conread position: | 4-176 |
| Cow position: | chr18:33751428-33751604 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 4-393 |
| Cow position: | chr18:29238065-29238475 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 4-394 |
| Cow position: | chr18:14131560-14131974 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 379 |
| Conread position: | 4-394 |
| Cow position: | chr18:14417146-14417550 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 255 |
| Conread position: | 4-394 |
| Cow position: | chr18:25352423-25352843 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 4-394 |
| Cow position: | chr18:29865444-29865027 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 275 |
| Conread position: | 4-394 |
| Cow position: | chr18:41839645-41839226 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 4-394 |
| Cow position: | chr18:52652076-52652497 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 4-394 |
| Cow position: | chr18:54005005-54004589 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 369 |
| Conread position: | 4-398 |
| Cow position: | chr18:16175449-16175030 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 5-392 |
| Cow position: | chr18:23798817-23799231 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 7-394 |
| Cow position: | chr18:54170340-54169922 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 51-391 |
| Cow position: | chr18:46884412-46884073 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 135, 89 |
| Conread position: | 163-398 |
| Cow position: | chr18:17672462-17672213 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 631-863 |
| Cow position: | chr18:16392556-16392319 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 633-859 |
| Cow position: | chr18:35054691-35054914 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 641-858 |
| Cow position: | chr18:33752268-33752485 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 641-863 |
| Cow position: | chr18:4947525-4947742 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 641-863 |
| Cow position: | chr18:19353937-19354162 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 641-863 |
| Cow position: | chr18:27538433-27538658 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 642-863 |
| Cow position: | chr18:42516197-42516425 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 654-859 |
| Cow position: | chr18:51695286-51695493 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 654-863 |
| Cow position: | chr18:51461466-51461255 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 680-863 |
| Cow position: | chr18:32166313-32166128 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.