Cow genome map
| Conread name: | Tra1-TCH01C100049 |
| Conread position: | 2-398 |
| Cow position: | chr25:11931662-11931250 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 159 |
| Conread position: | 2-398 |
| Cow position: | chr25:17655556-17655968 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 253 |
| Conread position: | 4-388 |
| Cow position: | chr25:15365072-15365469 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 241 |
| Conread position: | 4-393 |
| Cow position: | chr25:18192643-18192231 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 4-394 |
| Cow position: | chr25:22148659-22149079 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 5-394 |
| Cow position: | chr25:17588437-17588028 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 306 |
| Conread position: | 16-394 |
| Cow position: | chr25:13782165-13782585 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 20-394 |
| Cow position: | chr25:25507837-25508245 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 47-293 |
| Cow position: | chr25:26899853-26900113 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 104, 220 |
| Conread position: | 56-399 |
| Cow position: | chr25:14957271-14956918 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 193 |
| Conread position: | 637-863 |
| Cow position: | chr25:19922059-19922290 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 639-849 |
| Cow position: | chr25:18178208-18178418 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 14, 132 |
| Conread position: | 641-863 |
| Cow position: | chr25:11041874-11042097 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 641-863 |
| Cow position: | chr25:17588041-17587818 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 159 |
| Conread position: | 641-863 |
| Cow position: | chr25:19339074-19338850 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 641-863 |
| Cow position: | chr25:26928801-26929026 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 641-863 |
| Cow position: | chr25:27021071-27020848 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 169 |
| Conread position: | 642-859 |
| Cow position: | chr25:18305666-18305883 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 649-863 |
| Cow position: | chr25:18273250-18273035 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 660-863 |
| Cow position: | chr25:13693123-13692918 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 688-863 |
| Cow position: | chr25:29358055-29358231 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 747-849 |
| Cow position: | chr25:13958435-13958537 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 749-859 |
| Cow position: | chr25:18192017-18191907 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 758-863 |
| Cow position: | chr25:33664479-33664374 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 101, 65 |
Show alignments to all cow chromosomes.