Cow genome map
| Conread name: | Tra1-TCH01C100049 |
| Conread position: | 2-182 |
| Cow position: | chr29:27262815-27262627 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-394 |
| Cow position: | chr29:34525324-34525718 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 4-394 |
| Cow position: | chr29:19654712-19655119 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 4-394 |
| Cow position: | chr29:23977208-23977622 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 317 |
| Conread position: | 4-394 |
| Cow position: | chr29:26163749-26163334 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 20-394 |
| Cow position: | chr29:5958697-5959074 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 201 |
| Conread position: | 20-394 |
| Cow position: | chr29:20252267-20252664 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 182 |
| Conread position: | 20-398 |
| Cow position: | chr29:47338-46954 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 191 |
| Conread position: | 35-394 |
| Cow position: | chr29:10647126-10646753 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 35-394 |
| Cow position: | chr29:42803534-42803891 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 159 |
| Conread position: | 47-398 |
| Cow position: | chr29:5981574-5981205 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 84 |
| Conread position: | 113-394 |
| Cow position: | chr29:2101035-2101338 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 129-394 |
| Cow position: | chr29:40501785-40501508 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 200 |
| Conread position: | 152-391 |
| Cow position: | chr29:4633380-4633136 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 125 |
| Conread position: | 161-394 |
| Cow position: | chr29:14210291-14210053 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 191-394 |
| Cow position: | chr29:43324811-43325018 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 628-863 |
| Cow position: | chr29:13851400-13851167 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 184 |
| Conread position: | 630-863 |
| Cow position: | chr29:32287726-32287957 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 16 |
| Conread position: | 631-859 |
| Cow position: | chr29:27812568-27812789 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 106, 69 |
| Conread position: | 632-863 |
| Cow position: | chr29:8664983-8665221 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 633-863 |
| Cow position: | chr29:13622380-13622147 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 640-863 |
| Cow position: | chr29:2691648-2691873 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 641-841 |
| Cow position: | chr29:34798325-34798123 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 641-859 |
| Cow position: | chr29:26163347-26163127 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 641-861 |
| Cow position: | chr29:36634896-36634675 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 641-863 |
| Cow position: | chr29:609162-608937 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 641-863 |
| Cow position: | chr29:5959061-5959286 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 641-863 |
| Cow position: | chr29:9641299-9641074 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 641-863 |
| Cow position: | chr29:13583567-13583792 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 641-863 |
| Cow position: | chr29:16172616-16172397 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 641-863 |
| Cow position: | chr29:42803878-42804102 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 646-859 |
| Cow position: | chr29:45206015-45206236 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 665-862 |
| Cow position: | chr29:2746951-2746754 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 135 |
| Conread position: | 688-863 |
| Cow position: | chr29:15625187-15625011 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 66 |
| Conread position: | 699-859 |
| Cow position: | chr29:9082340-9082181 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 134 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.