Cow genome map


           Conread name:
           Tra1-TCH01C100049
        

               Conread position:
               2-182
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-394
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 100
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 74
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 317
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 13
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 201
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 182
               

               Conread position:
               20-398
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               28, 191
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 159
               

               Conread position:
               47-398
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 84
               

               Conread position:
               113-394
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               129-394
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 200
               

               Conread position:
               152-391
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 125
               

               Conread position:
               161-394
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               191-394
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               628-863
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               27, 184
               

               Conread position:
               630-863
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 16
               

               Conread position:
               631-859
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               106, 69
               

               Conread position:
               632-863
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               633-863
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               640-863
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               641-841
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               641-859
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               641-861
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               646-859
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               665-862
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 135
               

               Conread position:
               688-863
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               699-859
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               134
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 0
               
Show alignments to all cow chromosomes.