Cow genome map


           Conread name:
           Tra1-TCH01C100049
        

               Conread position:
               2-391
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 114
               

               Conread position:
               4-301
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 74
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 273
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 286
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 30
               

               Conread position:
               4-397
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 11
               

               Conread position:
               5-280
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               36, 142
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 349
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 362
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 45
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 204
               

               Conread position:
               35-394
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 236
               

               Conread position:
               44-398
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               107, 54
               

               Conread position:
               47-394
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               80-398
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               82, 33
               

               Conread position:
               90-391
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               144, 57
               

               Conread position:
               136-394
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               58, 138
               

               Conread position:
               183-396
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               195-394
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 178
               

               Conread position:
               209-394
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               244-387
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               631-859
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               638-863
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               639-858
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 151
               

               Conread position:
               641-859
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 130
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               17, 146
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 130
               

               Conread position:
               646-858
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               646-859
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               647-863
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               67, 37
               

               Conread position:
               648-863
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               211, 53
               

               Conread position:
               650-863
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               654-858
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 42
               

               Conread position:
               654-862
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 146
               

               Conread position:
               661-857
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 42
               

               Conread position:
               670-863
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               683-863
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 7
               

               Conread position:
               689-863
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               706-859
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               8, 0
               
Show alignments to all cow chromosomes.