Cow genome map


           Conread name:
           Tra1-TCH01C100049
        

               Conread position:
               2-394
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               57, 45
               

               Conread position:
               2-397
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               2-397
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 113
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               4-391
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 254
               

               Conread position:
               4-393
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 122
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 7
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 338
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 51
               

               Conread position:
               4-397
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               4-398
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               4-398
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 356
               

               Conread position:
               7-388
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 309
               

               Conread position:
               12-390
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               13-394
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 27
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               21-398
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 60
               

               Conread position:
               35-391
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               121, 12
               

               Conread position:
               47-394
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               75, 63
               

               Conread position:
               47-394
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               47-394
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               47-398
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               134-394
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               229-397
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 52
               

               Conread position:
               246-394
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               254-398
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               628-863
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 129
               

               Conread position:
               628-863
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 104
               

               Conread position:
               630-861
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               631-863
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               632-863
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               633-863
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               641-860
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               646-863
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               647-863
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 50
               

               Conread position:
               648-863
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               67, 125
               

               Conread position:
               650-863
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               671-863
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               672-863
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               157
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               698-863
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               150, 90
               

               Conread position:
               707-863
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               713-863
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               737-859
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.